Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00020 ATGGAGTCTCAACCACTTCACATGTTTGGTCTTGCAATATCCTTTTTCCTCTTCATTATTTTGGCACTCAAAATAGGGACCAATCTCAAGAAAACTGAGTCATCTCAAAAAATACCACCAGGACCATGGAAGCTACCTGTCATAGGAAACATACACAATCTTCTTTCATCTGCACCACACAGAAAATTAAGAGACTTGGCCAAAATATATGGTCCCTTGATGCATCTTCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACCCATGATCTCATCTTTGCATCAAGGCCTACAATTCTAGCTTCTGATATACTAACTTATGAGTCCACTGATATAATTTTTGCACCCTATGGAAACTATTGGAGACAGCTACGAAAAATCTGCACAGTGGAGCTTTTCACCCAAAAACGTGTGAGCTCATTCCAGCCAATAAGAGAAGAGGAACTCACCCATCTTGTCAAAATCATCGATTCACATAAAGGGTCTCTCTTCAACCTCACTGAAGCAGTGCTTTCATCGGTGTATAACATCATGTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAGGAATTCATATCAGTGGTGAAAGAAGCCGTGGTAAGTGGATCAGGTTTCAACATAGGAGATCTGTTTCCTTCAGCTGAGTGGCTTCAAACAGTTACTGGTTTGAGGCCTAAGCTCGAGAGACTGCACCGACAAACAGATAGGATATTAGGAGACATCATCAGTGAACACAAAGCAGCAAAGTCCAAAGGTGAAGCAGAGGAAGATTTGGTAGATGTTCTTCTGAAATTCCTTGATGGTAATGAAAGTAACCAGGATATTTGCTTAACTATTGACAATATCAAGGCTATAATCCTGGATGTGTTTGCTTCTGGAGGAGAGACATCAGCAACTACCATTATTTGGGCAATGGCAGAGATGATGAAGGATCCAAGAGTAATGAAGAAAGTACAAGTTGAGGTGAGAGAGGTATTCAATATGAAAGGAAGAGTTGATAAAGTTTGCATGGATGAACTCAAATATTTGAAGTTAGTTGTGAAAGAGACCCTAAGGTTACATCCACCAGCTCCTCTTTTACTTCCAAGAGAAAGTAGAGAAGCATGTGAGATTAGTGGGTATCATATTCCAGTCAAAAGCAAGGTGATTGTGAATGCTTGGGCAATTGGAAGAGATTCTAATCATTGGAGTGAAGCAGAAAGGTTTTATCCAGAGAGATTCATTGATAGCTCTGTTGACTACAAAGGAAACAATTTTGAGTACATTCCTTTTGGTGGTGGAAGAAGAATATGCCCAGGAAGCACATTTGGTCTGATCAGTGTTGAGCTCACACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCATGGGAATGAAAAATGAGGATTTGGACATGACCGAGCAGTTTGGAGTCACTGTTAGAAGAAAAGATGACGTATACTTGATACCTGTCACTTCTCCATCTTTTCTGGTAAGATAA 1521 0.403 MESQPLHMFGLAISFFLFIILALKIGTNLKKTESSQKIPPGPWKLPVIGNIHNLLSSAPHRKLRDLAKIYGPLMHLQLGEVFTIIVSSPEYAKEIMKTHDLIFASRPTILASDILTYESTDIIFAPYGNYWRQLRKICTVELFTQKRVSSFQPIREEELTHLVKIIDSHKGSLFNLTEAVLSSVYNIMSRAAFGMKCKDQEEFISVVKEAVVSGSGFNIGDLFPSAEWLQTVTGLRPKLERLHRQTDRILGDIISEHKAAKSKGEAEEDLVDVLLKFLDGNESNQDICLTIDNIKAIILDVFASGGETSATTIIWAMAEMMKDPRVMKKVQVEVREVFNMKGRVDKVCMDELKYLKLVVKETLRLHPPAPLLLPRESREACEISGYHIPVKSKVIVNAWAIGRDSNHWSEAERFYPERFIDSSVDYKGNNFEYIPFGGGRRICPGSTFGLISVELTLAFLLYHFDWKLPMGMKNEDLDMTEQFGVTVRRKDDVYLIPVTSPSFLVR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00020 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Viun2g00020 506 CDD CYP71-like 70 492 - -
Viun2g00020 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 FunFam Cytochrome P450 71D8 31 497 - -
Viun2g00020 506 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 Pfam Cytochrome P450 39 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PANTHER OS08G0105600 PROTEIN 62 498 - -
Viun2g00020 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00020 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00020 Viun-Chr2 497330 504353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00020 16 498 Cytochrome P450 AT3G26300 43.673 2.77e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00020 - - gmx:102665189 839.721