LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun2g00017	ATGGACGACCAAATTGTTGACAATGACAACGATGTCGACCTTGTTCCGAGAGTTCACATGTGCTTCGAGACACTTGATGCAGTTAAAAAATTTTACAGAGACTTTGCTATTAGAACTGGATTTGGTATTAGAATAAGAAGTTCAAAGAAGGGAAAGGACAACGAACTTAAATATGTTAAACTTGTCTGTTGTCGTGAAGGTAATTATGTCTCCACCATACGTCCAGAGGTTAAGACACTACCTAGCCAGACCAAGCAATGTCAGGCTGGAATATCGGTTGGTAAAAAAGATGGGAAATGGCACATAAGAAGTGTTGTCATGGAGCACAGCCACAATATTAGTCCTATTGAATCAAGGCTGATATCAGGAAATCAAAAAGTTAATATTCATGCTAGGCAAACAGTTGACATAAACGACGAAGCCGGGGTCCGCATCAACAAGAGTTATCGTTCACTGGTGTGCGAAGCTGGAGGATATGAAGCTCATAAAAGAAGGCAATTATGCAAGGATGGGGATGGACAAGCTTTGCTTCGACACTTTTCCCACATGCGTGAAGTCAACAATGATTTCTTCTTTGAAATTGACATGGACGAAGACAATAGAATATCAAATGTTTTTTGGGCGGATTCAAGGAGCCGAGCGGCATGCGAGTATTTTGGTGATGTTGTATCGTTTGACACAACATATTTGACAAACAAGTACGACATGCCATTTGCACCGTTTGTTGGTGTTAATCACCACTGGCAATCAATTTTATTGGGGTGTGGTCTAGTATCTGCAGAGGACACATCAACATTTGTATGGTTGTTTAGGTGTTGGTTACGTTGCATGTCCAACAGGGCACCTGAAGGGATCATCACTGACCAGTGCAAAGCTATGCGCAATGCAATTCAAATTGTTTTCCCCAACACTAATCATAGATGGTGCCTTTGGCATATAATGAAAAAGGTTCCAGAAAAATTGTAG	966	0.4099	MDDQIVDNDNDVDLVPRVHMCFETLDAVKKFYRDFAIRTGFGIRIRSSKKGKDNELKYVKLVCCREGNYVSTIRPEVKTLPSQTKQCQAGISVGKKDGKWHIRSVVMEHSHNISPIESRLISGNQKVNIHARQTVDINDEAGVRINKSYRSLVCEAGGYEAHKRRQLCKDGDGQALLRHFSHMREVNNDFFFEIDMDEDNRISNVFWADSRSRAACEYFGDVVSFDTTYLTNKYDMPFAPFVGVNHHWQSILLGCGLVSAEDTSTFVWLFRCWLRCMSNRAPEGIITDQCKAMRNAIQIVFPNTNHRWCLWHIMKKVPEKL	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun2g00017	321	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	6	318	IPR031052	GO:0006355
	Viun2g00017	321	Pfam	MULE transposase domain	222	316	IPR018289	-
	Viun2g00017	321	Pfam	FAR1 DNA-binding domain	30	114	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun2g00017	Viun-Chr2	455276	456241	Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Viun2g00017		MULE	1.1e-33	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun2g00017	-		-	vun:114180824	503.056