Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00014 ATGGACGACCAAATTGTTGACAATGACAACGATGTCGACCTTGTTCCGAGAGTTCACATGTGCTTCGAGACACTTGATGCAGTTAAAAAATTTTACAGAGACTTTGCTATTAGAACTGGATTTGGTATTAGAATAAGAAGTTCAAAGAAGGGAAAGGACAACGAACTTAAATATGTTAAACTTGTCTGTTGTCGTGAAGGTAATTATGTCTCCACCATACGTCCAGAGGTTAAGACACTACCTAGCCAGACCAAGCAATGTCAGGCTGGAATATCGGTTGGTAAAAAAGATGGGAAATGGCACATAAGAAGTGTTGTCATGGAGCACAACCACAATATTAGTCCTATTGAATCAAGGCTGATATCAGGAAATCAAAAGTTAATATTCATGCTAGGCAAACAGTTGACATAA 411 0.3844 MDDQIVDNDNDVDLVPRVHMCFETLDAVKKFYRDFAIRTGFGIRIRSSKKGKDNELKYVKLVCCREGNYVSTIRPEVKTLPSQTKQCQAGISVGKKDGKWHIRSVVMEHNHNISPIESRLISGNQKLIFMLGKQLT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00014 136 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 115 - -
Viun2g00014 136 Pfam FAR1 DNA-binding domain 30 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00014 Viun-Chr2 357309 357719 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g00014 FAR1 4.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00014 - - vun:114180824 167.548