Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00010 ATGGGAACACAAAAATCTAATATGTTTGATACAGCTTACAATTATTTGGTGCCTGAAGATGAAATTCTTGACAAACCTTTGCCAACACACTGGGCTCCTTCTATGCAGGCATATAACAATTCTGCGTCTACCCCGATTCCCTTTTTATATCAACACGCAGCTGGTTACATGCCTCTCTATATGTGGCCAAACCAGGCAAACTGCACACTACTTCAATCTGATGTTTTACAGGATCCAATGAAGCTCTCCAGTAAACCTAAAGTATCTGAGGATGCTGTACTGGCCTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTAAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAGGAATCAAGAGGAGATGGAAGCAATTCTTCGATACTGAAAAACAAGGATAGAGTGTTGTGCAGTGAAGCATATGGAAACAAGGGATCACTACATGAAGACCATGACACTGCTAATGATTTTCCTTCAACTAAGGAGCAATACTGTAATTTGATGCTTGAAAATGCAAGTTCAACGCAACCAAATCAGGGTTTGGAGACGGGCCTAGATGCAATTGGCACTAACACTGAACTTGTGAAGTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAATAGGGAATCGGCTAGGAGATCAAGGATGCGGAAAGAGAGGGAATGTGAAGAGTTACATAAAAAAATGGAAATTCTTAAGGATGAAAACTCCGTGCTCACACAAAGGCTCAAGAGTCTTTCTGAGGAATGTCTGGAAATCTGCAATGAAAATGATGCGATAGAGGAAGAGCTGGTTAAAATGTATGGAACAGAATCAATATCATATCTGTTGGCCATGAAGCCACGCTGA 891 0.3962 MGTQKSNMFDTAYNYLVPEDEILDKPLPTHWAPSMQAYNNSASTPIPFLYQHAAGYMPLYMWPNQANCTLLQSDVLQDPMKLSSKPKVSEDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESRGDGSNSSILKNKDRVLCSEAYGNKGSLHEDHDTANDFPSTKEQYCNLMLENASSTQPNQGLETGLDAIGTNTELVKLEKDEIRRERKRQSNRESARRSRMRKERECEELHKKMEILKDENSVLTQRLKSLSEECLEICNENDAIEEELVKMYGTESISYLLAMKPR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00010 296 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 216 231 IPR004827 GO:0003700|GO:0006355
Viun2g00010 296 SUPERFAMILY Leucine zipper domain 212 267 IPR046347 GO:0003700|GO:0006355
Viun2g00010 296 CDD bZIP_plant_GBF1 214 264 IPR045314 GO:0003700|GO:0006355
Viun2g00010 296 SMART brlzneu 209 273 IPR004827 GO:0003700|GO:0006355
Viun2g00010 296 PANTHER G-BOX-BINDING FACTOR 3-RELATED 26 283 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun2g00010 296 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 211 263 IPR004827 GO:0003700|GO:0006355
Viun2g00010 296 MobiDBLite consensus disorder prediction 215 234 - -
Viun2g00010 296 Pfam bZIP transcription factor 210 266 IPR004827 GO:0003700|GO:0006355
Viun2g00010 296 Gene3D - 212 269 - -
Viun2g00010 296 Coils Coil 222 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00010 Viun-Chr2 97558 104462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00010 1 290 bZIP Transcription Factor Family AT4G36730 28.664 5.26e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g00010 bZIP_1 4.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00010 K09060 - gmx:102665715 454.136