Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00009 ATGGGAACACAAAAATCTAATATGTTTGATACAGCTTACAATTATTTGGTGCCTGAAGATGAAATTCTTGACAAACCTTTGCCAACACACTGGGCTCCTTCTATGCAGGCAAACTGCACACTACTTCAATCTGATGTTTTACAGGATCCAATGAAGCTCTCCAGTAAACCTAAAGTATCTGAGGATGCTGTACTGGCCTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTAAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAGGAATCAAGAGGAGATGGAAGCAATTCTTCGATACTGAAAAACAAGGATAGAGTGTTGTGCAGTGAAGCATATGGAAACAAGGGATCACTACATGAAGACCATGACACTGCTAATGATTTTCCTTCAACTAAGGAGCAATACTGTAATTTGATGCTTGAAAATGCAAGTTCAACGCAACCAAATCAGGGTTTGGAGACGGGCCTAGATGCAATTGGCACTAACACTGAACTTGTGAAGTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAATAGGGAATCGGCTAGGAGATCAAGGATGCGGAAAGAGAGGGAATGTGAAGAGTTACATAAAAAAATGGAAATTCTTAAGGATGAAAACTCCGTGCTCACACAAAGGCTCAAGAGTCTTTCTGAGGAATGTCTGGAAATCTGCAATGAAAATGATGCGATAGAGGAAGAGCTGGTTAAAATGTATGGAACAGAATCAATATCATATCTGTTGGCCATGAAGCCACGCTGA 804 0.3905 MGTQKSNMFDTAYNYLVPEDEILDKPLPTHWAPSMQANCTLLQSDVLQDPMKLSSKPKVSEDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESRGDGSNSSILKNKDRVLCSEAYGNKGSLHEDHDTANDFPSTKEQYCNLMLENASSTQPNQGLETGLDAIGTNTELVKLEKDEIRRERKRQSNRESARRSRMRKERECEELHKKMEILKDENSVLTQRLKSLSEECLEICNENDAIEEELVKMYGTESISYLLAMKPR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00009 267 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 234 IPR004827 GO:0003700|GO:0006355
Viun2g00009 267 SUPERFAMILY Leucine zipper domain 183 238 IPR046347 GO:0003700|GO:0006355
Viun2g00009 267 PANTHER G-BOX-BINDING FACTOR 3-RELATED 150 254 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun2g00009 267 MobiDBLite consensus disorder prediction 186 205 - -
Viun2g00009 267 Coils Coil 193 248 - -
Viun2g00009 267 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Viun2g00009 267 Gene3D - 183 240 - -
Viun2g00009 267 CDD bZIP_plant_GBF1 185 235 IPR045314 GO:0003700|GO:0006355
Viun2g00009 267 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Viun2g00009 267 Pfam bZIP transcription factor 181 237 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00009 Viun-Chr2 97555 104465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00009 126 261 bZIP Transcription Factor Family AT4G36730 34.437 9.15e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g00009 bZIP_1 3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00009 K09060 - gmx:102665715 398.282