Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00008 ATGGGAACACAAAAATCTAATATGTTTGATACAGCTTACAATTATTTGGTGCCTGAAGATCAGGAAATTCTTGACAAACCTTTGCCAACACACTGGGCTCCTTCTATGCAGGCATATAACAATTCTGCGTCTACCCCGATTCCCTTTTTATATCAACACGCAGCTGGTTACATGCCTCTCTATATGTGGCCAAACCAGGCAAACTGCACACTACTTCAATCTGATGTTTTACAGGATCCAATGAAGCTCTCCAGTAAACCTAAAGTATCTGAGGATGCTGTACTGGCCTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTAAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAGGAATCAAGAGGAGATGGAAGCAATTCTTCGATACTGAAAAACAAGGATAGAGTGTTGTGCAGTGAAGCATATGGAAACAAGGGATCACTACATGAAGACCATGACACTGCTAATGATTTTCCTTCAACTAAGGAGCAATACTGTAATTTGATGCTTGAAAATGCAAGTTCAACGCAACCAAATCAGGGTTTGGAGACGGGCCTAGATGCAATTGGCACTAACACTGAACTTGTGAAGTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAATAGGGAATCGGCTAGGAGATCAAGGATGCGGAAAGAGAGGGAATGTGAAGAGTTACATAAAAAAATGGAAATTCTTAAGGATGAAAACTCCGTGCTCACACAAAGGCTCAAGAGTCTTTCTGAGGAATGTCTGGAAATCTGCAATGAAAATGATGCGATAGAGGAAGAGCTGGTTAAAATGTATGGAACAGAATCAATATCATATCTGTTGGCCATGAAGCCACGCTGA 894 0.3971 MGTQKSNMFDTAYNYLVPEDQEILDKPLPTHWAPSMQAYNNSASTPIPFLYQHAAGYMPLYMWPNQANCTLLQSDVLQDPMKLSSKPKVSEDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESRGDGSNSSILKNKDRVLCSEAYGNKGSLHEDHDTANDFPSTKEQYCNLMLENASSTQPNQGLETGLDAIGTNTELVKLEKDEIRRERKRQSNRESARRSRMRKERECEELHKKMEILKDENSVLTQRLKSLSEECLEICNENDAIEEELVKMYGTESISYLLAMKPR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00008 297 CDD bZIP_plant_GBF1 215 265 IPR045314 GO:0003700|GO:0006355
Viun2g00008 297 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 217 232 IPR004827 GO:0003700|GO:0006355
Viun2g00008 297 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 212 264 IPR004827 GO:0003700|GO:0006355
Viun2g00008 297 PANTHER G-BOX-BINDING FACTOR 3-RELATED 27 284 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun2g00008 297 MobiDBLite consensus disorder prediction 216 235 - -
Viun2g00008 297 SUPERFAMILY Leucine zipper domain 213 268 IPR046347 GO:0003700|GO:0006355
Viun2g00008 297 SMART brlzneu 210 274 IPR004827 GO:0003700|GO:0006355
Viun2g00008 297 Coils Coil 223 278 - -
Viun2g00008 297 Pfam bZIP transcription factor 211 267 IPR004827 GO:0003700|GO:0006355
Viun2g00008 297 Gene3D - 213 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00008 Viun-Chr2 97478 104462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00008 21 291 bZIP Transcription Factor Family AT4G36730 29.514 1.48e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g00008 bZIP_1 4.2e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00008 K09060 - gmx:102665715 459.144