Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00007 ATGGGAACACAAAAATCTAATATGTTTGATACAGCTTACAATTATTTGGTGCCTGAAGATCAGGAAATTCTTGACAAACCTTTGCCAACACACTGGGCTCCTTCTATGCAGGCAAACTGCACACTACTTCAATCTGATGTTTTACAGGATCCAATGAAGCTCTCCAGTAAACCTAAAGTATCTGAGGATGCTGTACTGGCCTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTAAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAGGAATCAAGAGGAGATGGAAGCAATTCTTCGATACTGAAAAACAAGGATAGAGTGTTGTGCAGTGAAGCATATGGAAACAAGGGATCACTACATGAAGACCATGACACTGCTAATGATTTTCCTTCAACTAAGGAGCAATACTGTAATTTGATGCTTGAAAATGCAAGTTCAACGCAACCAAATCAGGGTTTGGAGACGGGCCTAGATGCAATTGGCACTAACACTGAACTTGTGAAGTTGGAAAAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAATAGGGAATCGGCTAGGAGATCAAGGATGCGGAAAGAGAGGGAATGTGAAGAGTTACATAAAAAAATGGAAATTCTTAAGGATGAAAACTCCGTGCTCACACAAAGGCTCAAGAGTCTTTCTGAGGAATGTCTGGAAATCTGCAATGAAAATGATGCGATAGAGGAAGAGCTGGTTAAAATGTATGGAACAGAATCAATATCATATCTGTTGGCCATGAAGCCACGCTGA 807 0.3916 MGTQKSNMFDTAYNYLVPEDQEILDKPLPTHWAPSMQANCTLLQSDVLQDPMKLSSKPKVSEDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESRGDGSNSSILKNKDRVLCSEAYGNKGSLHEDHDTANDFPSTKEQYCNLMLENASSTQPNQGLETGLDAIGTNTELVKLEKDEIRRERKRQSNRESARRSRMRKERECEELHKKMEILKDENSVLTQRLKSLSEECLEICNENDAIEEELVKMYGTESISYLLAMKPR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00007 268 PANTHER G-BOX-BINDING FACTOR 3-RELATED 151 255 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun2g00007 268 SUPERFAMILY Leucine zipper domain 184 239 IPR046347 GO:0003700|GO:0006355
Viun2g00007 268 SMART brlzneu 181 245 IPR004827 GO:0003700|GO:0006355
Viun2g00007 268 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Viun2g00007 268 Gene3D - 184 241 - -
Viun2g00007 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 235 IPR004827 GO:0003700|GO:0006355
Viun2g00007 268 Pfam bZIP transcription factor 182 238 IPR004827 GO:0003700|GO:0006355
Viun2g00007 268 MobiDBLite consensus disorder prediction 187 206 - -
Viun2g00007 268 Coils Coil 194 249 - -
Viun2g00007 268 CDD bZIP_plant_GBF1 186 236 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00007 Viun-Chr2 97478 104465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00007 127 262 bZIP Transcription Factor Family AT4G36730 34.437 9.92e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g00007 bZIP_1 3.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00007 K09060 - gmx:102665715 403.29