Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03558 ATGGGGGAGATAGAGAGAGAGGGAGTGTTGTCGAGGGAGAGGGAGGTAGAAGAGGAAGAAGAAGCGGAAGCCTCGGTGGAGATATGGAAATACATATTTGGATTTGTGGAAATGGCAGTGGTGAAATGTGCGATAGAGCTTGGCATAGCTGAAGCCATAGAAAAGCATGGAAGGGCGATGACAGTGTCGGAGATATCATCAGCTCTGGGGTGTGATCCTGCTCTTCTGAAACGCATAATGAGGTTCCTGGCGCACAGAAAGATATTCAAAGCCGTAACAGTGGGCGGCAGCAATGGCTATTCACAGACACCTCTGTCTCGGCGTTTGATGAGAGAGGGGCCACAGAGCATGGCCGCTTTTCTTTTGCTGGAAAGTAGTCCTGTAATGCTCGCACCATGGCACAGTCTAAGCGCTCGCGTCTTGGCCAATGGCCATCCCTCATTTCAAAACACTCACGGCGAAGACGTGTGGCGCTATGCCGCCGCCAATCTCGGCCACAGCAACCTCATCAACGAAGCGATGGCATGCGATGCTAAGCTTGTCATGCCTGTCATCATCGAAAGTTGCAACGAGGAATTCCGTGGTCTCCAGTCGGTGGTGGACGTGGGCGGGGGCAACGGCACCGCCATGCGCATCCTCCATCAAGCTCTCCCTTCCATTCGAGCCATCAATTTCGATCTTCCCCATGTCATCTCCCAGGCCCCTCACTCCGATGGCCTAGAACACGTGGCAGGAGACATGTTCCAGAGTGTTCCTAAAGCCGATGCTGCTTTTCTGATGTGGGTTTTGCACGACTGGTCGGACGAAGAGTGCATCGAAATCTTGAAGAAGTGCAGGGAAGCGATCTCGAAGGAAAATGGGTGGGTGATGATCGTTGAGGCGGTGATCGGAGAAGAAGGAGAAGGGAAGCAGAAGGTCCTGGAAGACGTGGGGCTGATGCTGGACATGGTGATGATGGCTCACACCAACTTTGGGAAAGAGCGGACCCTGAAAGAGTGGGAATATGTTATCAAAATGGCAGGCTTTAGCTCATTCACTGTCAAACACATTCACGCGGTTCAGTCTGTGATTCTTGCTTTCTACTGA 1086 0.523 MGEIEREGVLSREREVEEEEEAEASVEIWKYIFGFVEMAVVKCAIELGIAEAIEKHGRAMTVSEISSALGCDPALLKRIMRFLAHRKIFKAVTVGGSNGYSQTPLSRRLMREGPQSMAAFLLLESSPVMLAPWHSLSARVLANGHPSFQNTHGEDVWRYAAANLGHSNLINEAMACDAKLVMPVIIESCNEEFRGLQSVVDVGGGNGTAMRILHQALPSIRAINFDLPHVISQAPHSDGLEHVAGDMFQSVPKADAAFLMWVLHDWSDEECIEILKKCREAISKENGWVMIVEAVIGEEGEGKQKVLEDVGLMLDMVMMAHTNFGKERTLKEWEYVIKMAGFSSFTVKHIHAVQSVILAFY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03558 361 FunFam O-methyltransferase family protein 12 109 - -
Viun1g03558 361 PIRSF O-mtase 9 361 IPR016461 GO:0008168
Viun1g03558 361 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Viun1g03558 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 361 IPR016461 GO:0008168
Viun1g03558 361 CDD AdoMet_MTases 199 292 - -
Viun1g03558 361 Gene3D - 10 109 IPR036388 -
Viun1g03558 361 FunFam O-methyltransferase family protein 111 360 - -
Viun1g03558 361 Pfam O-methyltransferase domain 133 343 IPR001077 GO:0008171
Viun1g03558 361 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Viun1g03558 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 358 IPR029063 -
Viun1g03558 361 SUPERFAMILY "Winged helix" DNA-binding domain 18 113 IPR036390 -
Viun1g03558 361 PANTHER O-METHYLTRANSFERASE 38 345 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03558 Viun-Chr1 41984840 41986148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03558 41 347 Monolignol Biosynthesis Gene Families AT5G54160 35.962 9.61e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03558 K22588 - gmx:100782951 528.094