Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03538 ATGGCGATAAATGCAAGTGAAACGATGTTCCTGTCAATCACGCAAGTGGATGAAAGGAGACAAAAGTACGAGGTGTGTCTTGATGCTCCACCCCACATTGTTTCAGATGGGTTATGGCGTAGCAGCCCACAAAATACAAGAACTCCAATGAGATCTTTTCTCCCCTTGTTTGAGTTACAAGTCCTTCTAATATTTGCCATCACCCAAATCTGTCGACTCATCCTCATGCCCTTCAAAGTTCCTCTCTTTATTTCCCAGATGATGGCTGGGCTAATTCTGCAAGCTCTTTTTGTGGGGGAACCAGTGGGGTCGTACATGAGGGTGCTGTTTCCGTATGGAACTCACGACACCATCACAACAATAACGTCGATCGGTTTTGTGCTTTTCATTTTCATAAACGGTGTGCAGATGGATTTTAGCTTGATAACAAGAATGGGGAAGAAGGCATGGACCATTGCCATTACAGGATTGGTAGTGCCGATACTCACCGCAGTTGCATTCGTGTCCGTACTCAAATATCCACTGCTTGAAGTCGTCGATCGTAACTACCACAGTTTCCTTGTTGCATTGGTCTCCCACACTATCATTTCATTTGCCGTCATTGCTTCCCTTCTCAATGAACTTCAAATCCAAAACTCCGAACTTGGCAAATTGGCATTGTCTGCCGCATTGGTCAGTGACATATTGTGCACGTGCGCTACCACCATCGGCACTGTTTTTATGTTTAGTGAGGGTCATAGTTCCAAAGAGATTATTACAAACCTCGTTGGTTTGTTTGCAATGGCTGTCTCTGTTCCATTGGTGTGTCGCCCAGCAATGTTTTGGATCGTCAGACACACCCCAGAAGGAAGACCTGTGAAAGATGGTTACCTCTACGTCATCATCGTACTGCTCTTTGTCTTAGGTTGGGTTTCGGTTAAAATAAACCAGGAATTCGTGCTCGGAGCTTTCATTCTGGGATTGGCCGTGCCGGAGGGACCTCCACTTGGATCTGCATTGGTCAAGAAGCTTAACTTCTTCGGTACCACCTTCCTTCTGCCGATCTTCATCACCATCTGCATGCTGAAAGCTGATTTTTCCTCCACTTATTCCTCCACATCGGTTTTCGCTGTCTCTCTCGTCATCATGCTCACCCACCTGGTCAAAATTATATCCTGCATTCTACCCGCCCTCTTCTGCAACATGCCCTTCCGTGATGCTCTCTCCCTCTCACTCATTTTAAACTCCAAAGGCGTTGTGGAAATCGGACTCTACTGCTTCTTATACGACTACAAGATAATCGATGGGCTGACGTACGGAATAATGATTCTGAGCATAATCGTGGTAGCGTGCATAGTGCAATGGTCTGTGAGGTTTTTGTACGACCCTTCAAGAAAATACGCCGGGTACCAAAAGAGGAACATCATGAGCTTAAGAGCTTGGTCGGAGCTGAGGATACTGGTGTGCATTCACAAGCCAAGCCACATATCGTCGATGATAGACATGATTGACCTGTGTTGTCCAACGGCAGAAAGTCCAATCATAGTGGATGCATTGCATCTGATAGAGCTGGTGGGACGCGCCTTGCCAATTTTCATCCCCCATCGCATTCAAAGGCAGGAATCGGGGGTTCAACACAGGTCGTACTCAGATGACGTAATTCTTGCTTTCGACGTTTACGAGCACGAGAACCCTCACGTGGTGACGGCGTACCCTTGCACCGCAGTGTCTCCGCCGAGCCTGATGTACGAAGACGTTTGCAACCTTGCCTTTGACAAGGTGGCGTCCATCATAATTCTTCCGTTTCATCTGAGATGGTCGACGGACGGGGAAGTGGAATCGGAGGAGAAGAGCATAAGGGCACTGAATATTAGGGTGCTAGAAAAAGCTCCATGCTCGGTTGGGATCCTGGTGTCGCGAGGTTCGCAGAGGATGAGGGAGGAGGAGTCGATTCGAGTGGGGTTGATTTACGTGGGGGGAGAGGACGACGAGGAGGCGCTGTGCATAGCGAAGAGAGCGATGATGAAGAGAGGGATGAAGCTGGTGGTGTACCACCTGGTGTACGAGGCAGAGAAGGAGTGGGATGAAAGGGAAGCCATGGAAGAGATGAAACACAACATAAGGTACCAACAGATAGTGGCGAAGGAAGGGTCTGAGACAGCAGCGTTTCTGAGTGAGGTGGCGAAAGAGCATGACTTCTTCATCGTGGGAAGGAGGCATGGGATTGAGTCCCCTCAGACTCAGGGACTCACAAACTGGAGCGAATTCCCGGAGTTAGGTGTGATCGGAGACTTTCTGGCCTCACCGGATTTGGAGAGCCGCGCATCAATTTTGGTGGTGCAGCAACAAGTCGCACTCAAGCCTCGCAAAGGCTGGTTATTTTAG 2364 0.4865 MAINASETMFLSITQVDERRQKYEVCLDAPPHIVSDGLWRSSPQNTRTPMRSFLPLFELQVLLIFAITQICRLILMPFKVPLFISQMMAGLILQALFVGEPVGSYMRVLFPYGTHDTITTITSIGFVLFIFINGVQMDFSLITRMGKKAWTIAITGLVVPILTAVAFVSVLKYPLLEVVDRNYHSFLVALVSHTIISFAVIASLLNELQIQNSELGKLALSAALVSDILCTCATTIGTVFMFSEGHSSKEIITNLVGLFAMAVSVPLVCRPAMFWIVRHTPEGRPVKDGYLYVIIVLLFVLGWVSVKINQEFVLGAFILGLAVPEGPPLGSALVKKLNFFGTTFLLPIFITICMLKADFSSTYSSTSVFAVSLVIMLTHLVKIISCILPALFCNMPFRDALSLSLILNSKGVVEIGLYCFLYDYKIIDGLTYGIMILSIIVVACIVQWSVRFLYDPSRKYAGYQKRNIMSLRAWSELRILVCIHKPSHISSMIDMIDLCCPTAESPIIVDALHLIELVGRALPIFIPHRIQRQESGVQHRSYSDDVILAFDVYEHENPHVVTAYPCTAVSPPSLMYEDVCNLAFDKVASIIILPFHLRWSTDGEVESEEKSIRALNIRVLEKAPCSVGILVSRGSQRMREEESIRVGLIYVGGEDDEEALCIAKRAMMKRGMKLVVYHLVYEAEKEWDEREAMEEMKHNIRYQQIVAKEGSETAAFLSEVAKEHDFFIVGRRHGIESPQTQGLTNWSEFPELGVIGDFLASPDLESRASILVVQQQVALKPRKGWLF 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03538 787 PANTHER CATION/H + ANTIPORTER 33 777 - -
Viun1g03538 787 Pfam Sodium/hydrogen exchanger family 62 446 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun1g03538 787 Gene3D - 57 461 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03538 Viun-Chr1 41923328 41925892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03538 25 776 Antiporter Super Family AT2G28180 35.145 3.81e-148 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03538 K26731 - gmx:100785062 1168.3