Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03482 ATGTGGGGCAAGATGTTGAAATCCTTATGGAAAAGTTTTCAACATAAGTGTGTGGAGAGGCAAAAGAGTGAAGTTGATGAAAGTGTGTCAGTGCATGTGCATGGTGAAGACTTGGTCGTTTTGCCTGTGCAGTGTTGCAACTCTTGCATAGAAGAAACCAAACAATGCAATTGTGACCATATTCATGCCGCAGAAGACGCCAATCTCCACGCTCAGCGTCATGCTAACTCCAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCGTAGGTTTGGGGCAACTATCAACTCCATATGCTGTGGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTGTAGGACTAGGTGTGATGTGTGCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTATGGATATTGGGAAACATGCATTTGGATCAAAAGGAAGGTTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATTTCATTACATGATAACTTGATCACAGTCTTTCTGGGGACAAATCTGAAGCACCACTTCCCCAGATTCTCTTCATCTCAGTTCCTAACTGCGGTGGCAGTCCTCATTGCCCTCCCTAGTTTATGGATCAGAGACCTCTCTTCCATATCTTTTCTTTCAACACTTGGTATTCTCATGTCTCTACTCATTTTTCTGTGTGTAGCAGCCACTGCAGTTTTAGGACATGTCTCAAACAATCATGCCATACCTGTCCTCCAACTCCATAACATTCCATCGGTATCTGGCCTTTATGTCTTCGGCTATGGAGGACACATTGTTTTCCCCGAATTATACACAGCCATGAAAGACCCTTCAAAGTTTACCAAGGTTTCTGTTGTGAGCTTCGCAGTGGTTACAGCAATTTACACGACACTGGGGTTCATGGGTGCGAGGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTGAGCATGCCAGCAGAGAGCATTGTCACAAAGGTTGCTCTTTGGGCAACCGTGGTGGCACCAATGACCAAATACGCACTTGAATTCACACCTTTGGCAATTCAACTAGAACATGCACTTCCAAGTACCATGAGTGGGAGAACCAAGATGATTATTCGGGGTTGCGTTGGTTCATTTTCACTTTTGGTCATACTAACCCTTGCTCTGTCGGTTCCATATTTTGAACATGTACTAAGTCTCACCGGTTCCCTTGTTAGTGTTGCCGTTTGTTTGATTCTGCCATGTTCTTTCTACTTGAAGACATGTTGGGATCAGATATCAAACCCTGTCTTGCTCCTTAACCTCTTCCTCATCACATTTGGCTTTCTTCTTGCTCTCATGGGCACCATTTCCTCCTCAAAGTTGCTACTCAAAAGTTTTCAGTTGCATCACTCGAGTTAA 1428 0.4391 MWGKMLKSLWKSFQHKCVERQKSEVDESVSVHVHGEDLVVLPVQCCNSCIEETKQCNCDHIHAAEDANLHAQRHANSNSSFTHAVINMVGMLVGLGQLSTPYAVVSGGWVSAFLLVGLGVMCAYSSHILGTCLRKNPKLRSFMDIGKHAFGSKGRLVAATIIYMEIFMSLVSYTISLHDNLITVFLGTNLKHHFPRFSSSQFLTAVAVLIALPSLWIRDLSSISFLSTLGILMSLLIFLCVAATAVLGHVSNNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTAMKDPSKFTKVSVVSFAVVTAIYTTLGFMGARMFGKDVKSQITLSMPAESIVTKVALWATVVAPMTKYALEFTPLAIQLEHALPSTMSGRTKMIIRGCVGSFSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKTCWDQISNPVLLLNLFLITFGFLLALMGTISSSKLLLKSFQLHHSS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03482 475 Pfam Transmembrane amino acid transporter protein 78 459 IPR013057 -
Viun1g03482 475 PANTHER AMINO ACID TRANSPORTER 72 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03482 Viun-Chr1 41609534 41611583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03482 46 473 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.606 5.87e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03482 - - gmx:100786839 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03482 1 41609534 41611583 Viun1g03482 1 41609534 41611583 ECH