Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03456 ATGATTCCAACACTTGAAACAATGTTCCAAAGCACCTTCTCTTTTTCTTCTTCTTCTTCTTACTCTTGGTCCCTCATCACTCTTTTCCTCTCAACGCTACTCACTGCTCTTGCTATCTCCTTCAACTACTGGCTTGTCCCGGGGGGGTTCGCATGGAGAAAACATCAGAACCATTACAAACACCATGCAAAACCTCCCGGCCCAATGGGCTGGCCCGTGTTAGGGACCCTGCCTGAAATGGGCTCTCTGGCCCATGCAAAACTTGCTTCCATGGCCACTTCGCTGAAAGCAAAGAGGCTCATGGCACTCAGTCTTGGAACCAACCGGGTTGTTATCAGCAGCCACCCGGAGACCGCGAGAGAAATTCTTTGCGGGTCAGGCTTCTCGGACCGACCCGTTAAAGAATCGGCCCGAACGCTGATGTTTGAGCGGGCCATCGGATTTGCTCCGTATGGGACATACTGGCGCCACCTCCGTAAGGTGGCGGCCACGCACATGTTCTCTCCGAGGAAAATCTCCGATCTGGAGAGCCTCCGGCAAAGAGTGGCGGCTGATATGGTGAGGAAAACGTGGACGGAGATGGAGACGAAAGGGGTGGTGGAGGTTCGAGGGATATTACATGAAGCGTCTCTGAGAACCATGTTGGAGAGTGTTTTTGGAATCAATGATAATGGTATAGAATCAAAAAGAGAAGAGGTGTTGGGAGATATGATCAAGGAAGGGTATGAGTTGATTGCAACGTTTAACTGGGAAGACTATTTCCCCTTCAGGTTTTTGGACTTTCATGGCGTCAAGAGAAGATGTCACAGATTAACGAGTAAGGTTAAGAGTGTGGTGGGTGAGATCGTGGAAGAAAGAAAAACATGTGAAAAGCTGGTCGGAAAAACTGATTTTCTGAGCGCTTTGTTATCGTTGCCGGAAGAAGAAAAAATAGGTGAATCAGATACAGTGGCTATCTTATGGGAAATGTTGTTCCGAGGAACAGACACAGTTGCTATTCTTCTGGAATGGATTATGGCCATGATGGTGGTACACCAAGATGTTCAGGTGAAAGCCCGCCAAGAGATTGACACGTGCATTGGCCAAAACAGTCACGTGCGAGACTCCGACATTCCGAATCTCCCTTACCTTCAAGCGATAGTGAAGGAGGTGCTTCGATTGCACCCACCGGGCCCGTTGCTTTCATGGGCTCGTCTCGCAACCCATGACGTTCACATTGACAAGGTCTTAATACCTGCCGGCACAACTGCAATGGTTAACATGTGGGCCATATCACACGACTCGTCCATCTGGAAGGACCCGTGGGCCTTCAAGCCCGAACGATTCATTGATGAAGAAGTGTCGATCATGGGTTCAGACATGAGACTTGCACCGTTCGGTGCGGGCCGCAGGGTGTGCCCGGGCAAAACATTGGGCTTAGCCACTGTTCATCTGTGGCTCGCAGAGTTTCTTCACCGATTCGTATTGGTTCCGGCGCATGTGGATCTTTCAGAATGCCTTAAGCTCTCTATGGAAATGAAAAAGCCGTTACAGTTCAAAGTGATTCCTAGGTACAACACCACTAGCTCTTGA 1572 0.4955 MIPTLETMFQSTFSFSSSSSYSWSLITLFLSTLLTALAISFNYWLVPGGFAWRKHQNHYKHHAKPPGPMGWPVLGTLPEMGSLAHAKLASMATSLKAKRLMALSLGTNRVVISSHPETAREILCGSGFSDRPVKESARTLMFERAIGFAPYGTYWRHLRKVAATHMFSPRKISDLESLRQRVAADMVRKTWTEMETKGVVEVRGILHEASLRTMLESVFGINDNGIESKREEVLGDMIKEGYELIATFNWEDYFPFRFLDFHGVKRRCHRLTSKVKSVVGEIVEERKTCEKLVGKTDFLSALLSLPEEEKIGESDTVAILWEMLFRGTDTVAILLEWIMAMMVVHQDVQVKARQEIDTCIGQNSHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLATHDVHIDKVLIPAGTTAMVNMWAISHDSSIWKDPWAFKPERFIDEEVSIMGSDMRLAPFGAGRRVCPGKTLGLATVHLWLAEFLHRFVLVPAHVDLSECLKLSMEMKKPLQFKVIPRYNTTSS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03456 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Viun1g03456 523 PANTHER CYTOCHROME P450 78A7-RELATED 18 517 - -
Viun1g03456 523 FunFam Cytochrome P450 78A5 57 517 - -
Viun1g03456 523 Gene3D Cytochrome P450 51 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 Pfam Cytochrome P450 65 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 SUPERFAMILY Cytochrome P450 65 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g03456 523 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03456 Viun-Chr1 41484411 41486441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03456 22 517 Cytochrome P450 AT1G13710 51.172 1.74e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03456 - - ccaj:109797962 829.32