Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03454 ATGGCGGAGGAAGAAGAGAACGAGGTGTCGGCTCAACTCGAATTCCCGAAGAGTCGGGTTAAGAAGATCATAACGCTGGACAAGGATGTGAAGAGAGTGAGTTCAGAAGCGTTGTTCCTGGTGTCGCGCTCCACAGAGTTGTTCCTCCAATTTCTGGCTGAAAAATCTGCCAAAGTTGCCATTGAAAAGAAACGGAAGACCGTGAATCTGGAACACCTGAGAATGGCCGTTAAGAGGCACCAGCCAACCAGGGATTTTCTCCTCGACGATCTTCCGCCGCCGTCTCGGCCCGCCAAACCCGACGGGCCTACTCAGCCCGTTGTTCGGCCAAAACTTGATGCACCGCCGCCTGGTACTCGTCGCATCGATCAGTTTTTCCGAAAGCCAGTGCCTCAAAACCCAGCCCAAGTTCAATCGCCTGAAAATCCAGCCCAAGCCCAATCGTCTGAAATTCCTGCCCAAGCTCAAGCGCCCGAAATACCTTCTCAAGCTCAATCGCCTGAAGTTCCTTCTCAGGCTCAATCGCCGGAAGTTCCATCTCAAGTTCAATCGCCAGTACCGGTAGATGAGTCTTAG 576 0.5278 MAEEEENEVSAQLEFPKSRVKKIITLDKDVKRVSSEALFLVSRSTELFLQFLAEKSAKVAIEKKRKTVNLEHLRMAVKRHQPTRDFLLDDLPPPSRPAKPDGPTQPVVRPKLDAPPPGTRRIDQFFRKPVPQNPAQVQSPENPAQAQSSEIPAQAQAPEIPSQAQSPEVPSQAQSPEVPSQVQSPVPVDES 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03454 191 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 142 - -
Viun1g03454 191 MobiDBLite consensus disorder prediction 131 191 - -
Viun1g03454 191 MobiDBLite consensus disorder prediction 93 113 - -
Viun1g03454 191 MobiDBLite consensus disorder prediction 75 191 - -
Viun1g03454 191 FunFam Nuclear factor Y, subunit C13 1 92 - -
Viun1g03454 191 Gene3D Histone, subunit A 1 92 IPR009072 GO:0046982
Viun1g03454 191 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 77 IPR003958 -
Viun1g03454 191 SUPERFAMILY Histone-fold 9 93 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03454 5 128 CCAAT-HAP5 Transcription Factor Family AT5G43250 63.710 2.96e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Viun1g03454 CBFD_NFYB_HMF 2.1e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03454 - - vun:114164970 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03454 1 41473681 41474373 Viun1g03454 1 41473681 41474373 ECH