Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03431 ATGGAAGAGGAAATCAAATCCGAATTCAAAAGAAGCGGTTTCGATATCGAAGACGAACAAGAAATTCTCAGAAAATGTGTCACTTTCTGCACCGATTACAGTCTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTCATTACCTCAATAGACAGCTAAATCGACCAATTGTAGAAAGTGCTGAAATTGATGGCTTTCTGTTGCATCTACAAAATGAGAAGAAAGAGGACAGTATAAAGGAAAATGAAAAGGAAAAGGAAAGTGGCTTGCATACGTACTCTATAGGAGATGTAGAAATGCTCTTAAATAACGATGATGATACAAAGGACGATACTCCCGGAACTCCAATAAATCACCATCATGATCTCTTTCCTCCTTCAACTGAGCCAACATCTTTAATGTATGAGAATGTTTTATCTTCTGGGAAAGCATCAAAATCAAAACTAATAACACCCTTTTCAAAGCGAACAGATAGGTTTGCAGTGAAATTTAGCATCAACACTCTCCCTGGTGTCGAGAATGGGAAGCAGGAACCTGATCATGAGTATACTGAGAATGATGAAGATGATGTTCTCAGAAGAGTTCCACAACGTGAAAGGTGTTCATTGGTCATTCATGGATCAGGACTCAAACCGGGTTGTAAATTCATGTATGATAGAACGGAGGATAGGCTTAATGCAATAGAAAACCGAATTAGAAAACATACAAGGGCATTGGTAGCTTCTGGTCTCTATGAAGAACCAACAGACCCCACATCTGCTTCACAGAGGAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGCTGAAGGGCGTTTAAATGAGAAGTCTGTCATGTTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGCGTTCGCCTTGACTTACAACGTTTAAACCATTATTCAATTTTTCCTGGCCAGGTAGTTGGTATTGGAGGACATAATCCTAGTGGGCATTGCTTTATTGCATCTAAATTGGTGGATTCTATACCTATGTCTGTTGCTGATGAGAATTTGAATCCTCTGAAGAAGCAAGCTATTGATAAGGAGAATCAGTCTACTGATACGATTAGTAAACAAAGAGAGTTATCAATGATTATTGCGGCTGGTCCCTTTACTACGACAGACAATTTATTGTTTGAACCTCTTACAGAACTGCTGCTATACGCAAAACGAAGACCGCCACAGTTGCTTGTATTGCTGGGACCGTTTGTGGATTCTGAGCACCCAGATCTTAAGAAAGGAACCGTAGACAGGAGTTTTGATGAAATATTTCATTTTGAAATCGTGAGGAAGTTGGAAGATTATGTAGAGCGCGTGGGTTCTGGAACACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAACCATGATTTTGTGTTTCCTCAGCCCGCACTGGAAATCAATTTAACTGATTTCAAACCTCAGATAGTCAGTCTCGCTAATCCTGGAATCTTTGAGGCAAATGAGGTTAAGGTTGGTTGCTGTACCGTGGATATTCTCAAGCAAATCAGCGGAGAGGAGATATCGCGGACTGCAGCAGATGGAAAACCAATTGATCGTATGAGTAGACTTGCAAACCATATTCTCAACCAACAAAGCTTCTATCCACTTTACCCACCCGCAGAAAGTGTCCCGTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTTTCATTGGTTCCGGACGTACTTATCCTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTGGCAGCGAAAGTGAAGGCATAAATAACACGAAATGCATAGCTGTCAATCCGGGTAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTCGAGCTTGATTATGGTGGGGGTTCCAATCAAATTAACGCTTCAATTGTTGGCATTTGA 1884 0.4161 MEEEIKSEFKRSGFDIEDEQEILRKCVTFCTDYSLTPSDLVSSWEVHYLNRQLNRPIVESAEIDGFLLHLQNEKKEDSIKENEKEKESGLHTYSIGDVEMLLNNDDDTKDDTPGTPINHHHDLFPPSTEPTSLMYENVLSSGKASKSKLITPFSKRTDRFAVKFSINTLPGVENGKQEPDHEYTENDEDDVLRRVPQRERCSLVIHGSGLKPGCKFMYDRTEDRLNAIENRIRKHTRALVASGLYEEPTDPTSASQRSIFAVGMICCDAEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSIFPGQVVGIGGHNPSGHCFIASKLVDSIPMSVADENLNPLKKQAIDKENQSTDTISKQRELSMIIAAGPFTTTDNLLFEPLTELLLYAKRRPPQLLVLLGPFVDSEHPDLKKGTVDRSFDEIFHFEIVRKLEDYVERVGSGTRVLLVPSIRDANHDFVFPQPALEINLTDFKPQIVSLANPGIFEANEVKVGCCTVDILKQISGEEISRTAADGKPIDRMSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLGSESEGINNTKCIAVNPGRLAKGEGGGTFVELDYGGGSNQINASIVGI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03431 627 Gene3D - 517 623 - -
Viun1g03431 627 Gene3D - 345 513 - -
Viun1g03431 627 Pfam DNA polymerase alpha/epsilon subunit B 367 577 IPR007185 GO:0003677|GO:0006260
Viun1g03431 627 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 614 IPR016722 -
Viun1g03431 627 FunFam DNA polymerase alpha subunit B 347 512 - -
Viun1g03431 627 Coils Coil 218 238 - -
Viun1g03431 627 Gene3D - 1 64 IPR043034 -
Viun1g03431 627 PIRSF DNA_pol_alpha_2 1 615 IPR016722 -
Viun1g03431 627 FunFam DNA polymerase alpha subunit B 1 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03431 2 627 Core DNA Replication Machinery Family AT1G67630 57.870 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03431 K02321 - gmx:100795306 1006.13