Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g03410 | ATGTGTTTATGCTCTCTTTTTGTGATTACGCTTCTTCTTCTGTTAAGATCACATGTGCTGTGCCAACTTGAAGAGTTTATCAGTATTGACTGTGGAGGGACAAGTAACTACACTGATAAAAGAACGGGGCTTTCATGGATATCAGATTCTGGGATGATGAAACATGGGAAATCAGTGTTGGTACAAAATCGTAGTGAAAACAAGGTTCAGTATCAGAGGCGCAGAGACTTTCCGATAGACAGCAGAAAATACTGTTACACACTTGGCTCTGAGCAGAGAAGAAGGTATCTTGTGCGAGCAACGTTTCAGTATGGTATATTGGATGATGGTGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACAAAATGGGCTACTGTGTCAATATATGATGCCACAAGAACTTATGTGAAGGAAATGATCTTCAGGGCACCCTCAAACTCTGTTGATGTTTGCGTGTGCTGTGCTACCACCGGTTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGAGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGTAGTCAGGTACCCAGATGATCCATATGATAGAATTTGGGAGTCTGATCTTGTTAAAAGACAAAACTATCTGGTTGGGGTGGCCCCAGGAACTGAAAGAATTAATACAACAAAGAAAATAGAAATAGAGACAAGAGAATACCCACCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACAAAAGGAGCACTTAGCTATAGACTAAACCTGGAAGACTTCCCTGGAAATGCTAGAGCATATGCATATTTTGCAGAGATTGAAGATCTGGCTAATAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTACAGCAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGACCTACACTCTTTATGAACCAAGTTATATGAACGTGAGTCTTGAGTTTGTGCTTTCATTCTCCTTTGTTAAGACCCGGGATTCTACTCAAGGACCTATTCTGAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCGAAGACTGACAGACAAGATTCAAATTTTGTAAATGCGTTTCATTTCTTATCACCTGGAAGTGTGCTGATGAATGAAGGTGATCCCTGCGTTCCAACAACCTGGGACTGGGTAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATAAACCTGTCAAGAAGGAATCTGAAGGGTGAAATCCCACAGGATCTCAACAACATGGAATCATTGACAGAACTGTGGTTAGACGGGAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTGTGAATCTAAAGATTGTGCATCTGGAGAACAATAGATTGACTGGTCCATTACCATCTTACTTGGGTAGTTTACCAAGTTTACAAGCACTGTTCATACAGAATAACTCTTTTAGTGGGGTAATACCATCAGGGTTACTGTCAGGCAAAATAATTTTCAACTTTGATGATAACCCCGAACTGCATAAAGGGAGCAAGAAGCATTTTCAGTTGATGCTAGGAATTTCCATTGGAGTACTAGGGATTCTATTGATATTATTCTTAGCAAGTTTGATTCTATTGCTTAATCTGCGGAGAAAAACTTCTCGACAGAAACGAGATGAAAAGGGTATTTCTGGGCGCAGCAGTACTAAACCTTTAACAGGATACTCATTTGGTCGGGGTGGAAATTTAATGGATGAAGGTACTGCTTGCTATATTACACTCTCTGAGTTGAAAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGTGATGGAAAAGAGGTGGCAGTTAAGACCATGACCGATCCATCAAGCTATGGAAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATACTGTGAAGAAGAATATCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCACGAATGTTCGAACCAGAAGCAATTAGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAGAGGTCTTGAATACTTACACACAGGATGCAATCCAAGTATCATTCACCGTGATGTGAAGACAACCAATATTCTCTTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGACTTGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTACCTGGATCCTGAGTACTACGCAAATCAGCAATTGACTGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTTTGCTGGAACTGATATCAGGAAAAAAACCTGTATCTTCAGAAGACTATGGTCCTGAAATGAATATCGTTCACTGGGTAAGATCCTTGATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTTGTGGGGAATGCCAAAACTGAGTCAGTTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACACGGTGCCCACAGGCCCAAAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAGCATTGAAAAAGGCACAGAAAATCAACTAAAGTTATCATCTTCAGGAGCTTCAAAGCCACAGTCTTCGCGTAAGACTTTGCTTGCAAGTTTTCTAGAAATTGAGAGCCCTGACTTGTCAAATACTTGCCTACCCTCAGCTAGATAA | 2793 | 0.4049 | MCLCSLFVITLLLLLRSHVLCQLEEFISIDCGGTSNYTDKRTGLSWISDSGMMKHGKSVLVQNRSENKVQYQRRRDFPIDSRKYCYTLGSEQRRRYLVRATFQYGILDDGDTYPQFQLYLDATKWATVSIYDATRTYVKEMIFRAPSNSVDVCVCCATTGSPFISTLELRPLNLSMYATDFESSFFLKVAARINFGAPSEDVVRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTKKIEIETREYPPVKVMQTAVVGTKGALSYRLNLEDFPGNARAYAYFAEIEDLANNETRKFKLEQPYIADYSNAVVNIAENANGTYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPILNAMEISKYVQIASKTDRQDSNFVNAFHFLSPGSVLMNEGDPCVPTTWDWVNCSTTTPPRITKINLSRRNLKGEIPQDLNNMESLTELWLDGNLLTGQLPDMSNLVNLKIVHLENNRLTGPLPSYLGSLPSLQALFIQNNSFSGVIPSGLLSGKIIFNFDDNPELHKGSKKHFQLMLGISIGVLGILLILFLASLILLLNLRRKTSRQKRDEKGISGRSSTKPLTGYSFGRGGNLMDEGTACYITLSELKEATNNFSKKIGKGSFGSVYYGKMSDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSNQKQLDWLARLRIAEDAARGLEYLHTGCNPSIIHRDVKTTNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVRSLIRKGDVISIMDPSLVGNAKTESVWRVAEIAMQCVEQHGAHRPKMQEVILAIQDASSIEKGTENQLKLSSSGASKPQSSRKTLLASFLEIESPDLSNTCLPSAR | 930 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g03410 | 930 | SMART | serkin_6 | 608 | 884 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g03410 | 930 | ProSitePatterns | Protein kinases ATP-binding region signature. | 614 | 636 | IPR017441 | GO:0005524 | |
Viun1g03410 | 930 | Pfam | Malectin-like domain | 29 | 362 | IPR024788 | - | |
Viun1g03410 | 930 | Gene3D | Transferase(Phosphotransferase) domain 1 | 684 | 900 | - | - | |
Viun1g03410 | 930 | PANTHER | OS07G0107800 PROTEIN-RELATED | 456 | 881 | - | - | |
Viun1g03410 | 930 | Gene3D | Ribonuclease Inhibitor | 374 | 521 | IPR032675 | - | |
Viun1g03410 | 930 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 729 | 741 | IPR008271 | GO:0004672|GO:0006468 | |
Viun1g03410 | 930 | SUPERFAMILY | L domain-like | 399 | 509 | - | - | |
Viun1g03410 | 930 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 409 | 505 | - | - | |
Viun1g03410 | 930 | Pfam | Protein tyrosine and serine/threonine kinase | 610 | 875 | IPR001245 | GO:0004672|GO:0006468 | |
Viun1g03410 | 930 | SUPERFAMILY | Protein kinase-like (PK-like) | 594 | 875 | IPR011009 | - | |
Viun1g03410 | 930 | ProSiteProfiles | Protein kinase domain profile. | 608 | 884 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g03410 | 930 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 684 | 891 | - | - | |
Viun1g03410 | 930 | Gene3D | Phosphorylase Kinase; domain 1 | 587 | 683 | - | - | |
Viun1g03410 | 930 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 588 | 683 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g03410 | Viun-Chr1 | 41240511 | 41245643 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g03410 | 1 | 930 | Receptor kinase-like Gene Family | AT1G67720 | 69.239 | 0.0 | 1304 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Viun1g03410 | Malectin_like | 7.7e-90 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g03410 | - | - | gmx:100807148 | 1677.53 |