Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03410 ATGTGTTTATGCTCTCTTTTTGTGATTACGCTTCTTCTTCTGTTAAGATCACATGTGCTGTGCCAACTTGAAGAGTTTATCAGTATTGACTGTGGAGGGACAAGTAACTACACTGATAAAAGAACGGGGCTTTCATGGATATCAGATTCTGGGATGATGAAACATGGGAAATCAGTGTTGGTACAAAATCGTAGTGAAAACAAGGTTCAGTATCAGAGGCGCAGAGACTTTCCGATAGACAGCAGAAAATACTGTTACACACTTGGCTCTGAGCAGAGAAGAAGGTATCTTGTGCGAGCAACGTTTCAGTATGGTATATTGGATGATGGTGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACAAAATGGGCTACTGTGTCAATATATGATGCCACAAGAACTTATGTGAAGGAAATGATCTTCAGGGCACCCTCAAACTCTGTTGATGTTTGCGTGTGCTGTGCTACCACCGGTTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGAGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGTAGTCAGGTACCCAGATGATCCATATGATAGAATTTGGGAGTCTGATCTTGTTAAAAGACAAAACTATCTGGTTGGGGTGGCCCCAGGAACTGAAAGAATTAATACAACAAAGAAAATAGAAATAGAGACAAGAGAATACCCACCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACAAAAGGAGCACTTAGCTATAGACTAAACCTGGAAGACTTCCCTGGAAATGCTAGAGCATATGCATATTTTGCAGAGATTGAAGATCTGGCTAATAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTACAGCAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGACCTACACTCTTTATGAACCAAGTTATATGAACGTGAGTCTTGAGTTTGTGCTTTCATTCTCCTTTGTTAAGACCCGGGATTCTACTCAAGGACCTATTCTGAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCGAAGACTGACAGACAAGATTCAAATTTTGTAAATGCGTTTCATTTCTTATCACCTGGAAGTGTGCTGATGAATGAAGGTGATCCCTGCGTTCCAACAACCTGGGACTGGGTAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATAAACCTGTCAAGAAGGAATCTGAAGGGTGAAATCCCACAGGATCTCAACAACATGGAATCATTGACAGAACTGTGGTTAGACGGGAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTGTGAATCTAAAGATTGTGCATCTGGAGAACAATAGATTGACTGGTCCATTACCATCTTACTTGGGTAGTTTACCAAGTTTACAAGCACTGTTCATACAGAATAACTCTTTTAGTGGGGTAATACCATCAGGGTTACTGTCAGGCAAAATAATTTTCAACTTTGATGATAACCCCGAACTGCATAAAGGGAGCAAGAAGCATTTTCAGTTGATGCTAGGAATTTCCATTGGAGTACTAGGGATTCTATTGATATTATTCTTAGCAAGTTTGATTCTATTGCTTAATCTGCGGAGAAAAACTTCTCGACAGAAACGAGATGAAAAGGGTATTTCTGGGCGCAGCAGTACTAAACCTTTAACAGGATACTCATTTGGTCGGGGTGGAAATTTAATGGATGAAGGTACTGCTTGCTATATTACACTCTCTGAGTTGAAAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGTGATGGAAAAGAGGTGGCAGTTAAGACCATGACCGATCCATCAAGCTATGGAAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATACTGTGAAGAAGAATATCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCACGAATGTTCGAACCAGAAGCAATTAGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAGAGGTCTTGAATACTTACACACAGGATGCAATCCAAGTATCATTCACCGTGATGTGAAGACAACCAATATTCTCTTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGACTTGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTACCTGGATCCTGAGTACTACGCAAATCAGCAATTGACTGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTTTGCTGGAACTGATATCAGGAAAAAAACCTGTATCTTCAGAAGACTATGGTCCTGAAATGAATATCGTTCACTGGGTAAGATCCTTGATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTTGTGGGGAATGCCAAAACTGAGTCAGTTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACACGGTGCCCACAGGCCCAAAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAGCATTGAAAAAGGCACAGAAAATCAACTAAAGTTATCATCTTCAGGAGCTTCAAAGCCACAGTCTTCGCGTAAGACTTTGCTTGCAAGTTTTCTAGAAATTGAGAGCCCTGACTTGTCAAATACTTGCCTACCCTCAGCTAGATAA 2793 0.4049 MCLCSLFVITLLLLLRSHVLCQLEEFISIDCGGTSNYTDKRTGLSWISDSGMMKHGKSVLVQNRSENKVQYQRRRDFPIDSRKYCYTLGSEQRRRYLVRATFQYGILDDGDTYPQFQLYLDATKWATVSIYDATRTYVKEMIFRAPSNSVDVCVCCATTGSPFISTLELRPLNLSMYATDFESSFFLKVAARINFGAPSEDVVRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTKKIEIETREYPPVKVMQTAVVGTKGALSYRLNLEDFPGNARAYAYFAEIEDLANNETRKFKLEQPYIADYSNAVVNIAENANGTYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPILNAMEISKYVQIASKTDRQDSNFVNAFHFLSPGSVLMNEGDPCVPTTWDWVNCSTTTPPRITKINLSRRNLKGEIPQDLNNMESLTELWLDGNLLTGQLPDMSNLVNLKIVHLENNRLTGPLPSYLGSLPSLQALFIQNNSFSGVIPSGLLSGKIIFNFDDNPELHKGSKKHFQLMLGISIGVLGILLILFLASLILLLNLRRKTSRQKRDEKGISGRSSTKPLTGYSFGRGGNLMDEGTACYITLSELKEATNNFSKKIGKGSFGSVYYGKMSDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSNQKQLDWLARLRIAEDAARGLEYLHTGCNPSIIHRDVKTTNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVRSLIRKGDVISIMDPSLVGNAKTESVWRVAEIAMQCVEQHGAHRPKMQEVILAIQDASSIEKGTENQLKLSSSGASKPQSSRKTLLASFLEIESPDLSNTCLPSAR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03410 930 SMART serkin_6 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03410 930 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Viun1g03410 930 Pfam Malectin-like domain 29 362 IPR024788 -
Viun1g03410 930 Gene3D Transferase(Phosphotransferase) domain 1 684 900 - -
Viun1g03410 930 PANTHER OS07G0107800 PROTEIN-RELATED 456 881 - -
Viun1g03410 930 Gene3D Ribonuclease Inhibitor 374 521 IPR032675 -
Viun1g03410 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Viun1g03410 930 SUPERFAMILY L domain-like 399 509 - -
Viun1g03410 930 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 505 - -
Viun1g03410 930 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Viun1g03410 930 SUPERFAMILY Protein kinase-like (PK-like) 594 875 IPR011009 -
Viun1g03410 930 ProSiteProfiles Protein kinase domain profile. 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03410 930 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 684 891 - -
Viun1g03410 930 Gene3D Phosphorylase Kinase; domain 1 587 683 - -
Viun1g03410 930 FunFam receptor-like serine/threonine-protein kinase NCRK 588 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03410 Viun-Chr1 41240511 41245643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03410 1 930 Receptor kinase-like Gene Family AT1G67720 69.239 0.0 1304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun1g03410 Malectin_like 7.7e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03410 - - gmx:100807148 1677.53