Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03398 ATGGCAGCTGCTCTGTTACCTTGCGCACCCAACATAGTCTCTGCTCCGTTCAGGAACCGGAGCACGAGCCGCCTCCCCAACCGTCCTCAATCCCATGCTTTCTCCGGTTCGACCAGACACTTTCTTCGCGGTTCCCTCTCCGTCGCCCGGTTCGGATTCAAACCCGAATTCTTGCCCGAGCCGGAGGACGCTGAAGGCTTGCTCAGAGAACTGTTTGGTCGAGCGGAGGGACTTTTTTATACGATTGCAGACGCCGCCGTTTCTTCTTCTGACACGGTTGCTGCTTCCGCCACCGCCAAACAGAGCAACGATTGGCTTTCCGGAATCACTAATTACATGGAGACGGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCTCTAACCAAAAAGCAGGTAGAATCTGCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGTGATCAGGAGAGACTTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTTTAGCAGGATGCCTGCCCACACTCGCAACCATACCAGTGTGGATTGGGCTATATCGAGCCCTCTCAAATGTGGCAGACGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAATCGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTGCCCCTCCCCTTGGATGGTCTGATACATTGGCTTATCTGGTCTTGCCAGTATTGCTGGTCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTACTGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAACATATTGAGCACTGGACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATAAAAAATGACCGGAGCCAGGTTCAGAAGTCAATATCTAAGCTAAATTCCACAATAGCGGAAGAAGCCAGCCAAAGTGCGAAAACATCAGAGGGGCCACAACCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAGAAAAAAGGAAAGCCATGGAAACAGCAGCCAGAGAGACTAAAGTAGATGATAGTCACGTGACACTTGAGAAAACTGGAGATGATTTAACTGTTGAAAAATCTCTGTTGGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTGGTAAATGGTAACTTATTAAGTACAGACTTCGAGGGAAATCAGAATTTTACATCCACATCTCAGACAGAAAATAATGAAGGCTCTGCTCATTTCAACAATGATGAGATAAGCGAGGAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACTGCAAACAGACAACCTCCTGCAGAAGATGCAGATCACATGACAAAGGATTGA 1611 0.4562 MAAALLPCAPNIVSAPFRNRSTSRLPNRPQSHAFSGSTRHFLRGSLSVARFGFKPEFLPEPEDAEGLLRELFGRAEGLFYTIADAAVSSSDTVAASATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQERYAGDQERLQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGAPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPTDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTGQQVWLQKLGGAKNPVRQVPDDIIKNDRSQVQKSISKLNSTIAEEASQSAKTSEGPQPGDRFKQLKEQEARRRQQREEEEKRKAMETAARETKVDDSHVTLEKTGDDLTVEKSLLVGSDTDPSISGVVNGNLLSTDFEGNQNFTSTSQTENNEGSAHFNNDEISEENSDKEPREVLTSTTTANRQPPAEDADHMTKD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03398 536 MobiDBLite consensus disorder prediction 498 512 - -
Viun1g03398 536 MobiDBLite consensus disorder prediction 381 443 - -
Viun1g03398 536 MobiDBLite consensus disorder prediction 474 497 - -
Viun1g03398 536 PANTHER OXA1 83 412 IPR001708 GO:0016020|GO:0032977
Viun1g03398 536 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Viun1g03398 536 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Viun1g03398 536 Coils Coil 401 430 - -
Viun1g03398 536 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Viun1g03398 536 MobiDBLite consensus disorder prediction 474 536 - -
Viun1g03398 536 MobiDBLite consensus disorder prediction 399 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03398 Viun-Chr1 41188029 41193997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03398 71 415 Chloroplast and Mitochondria Gene Families AT2G28800 56.772 1.42e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03398 K03217 - gmx:100802546 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03398 1 41188029 41193997 Viun1g03398 1 41188029 41193997 ECH