Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03369 ATGCTTCTTGTTCTAAATTTTTTCATGACGAGTTTCCATTCTCGAAAACTACTTGTTCCGTTCCATGGTTCAATCGATGTTGCTGCCATGAACAGAAGAATCAGAAGCAGTTACAGTCCAATAGCTTCTCCTCTGCCCTCAGTAGTTCCACGTTCGTTTACATGGTTTCCACCACCCCTCCTCGATGGAGAACACGACCACCTTAACCTTGCATCCATCATTATAATTGGCCTAGGTAGCATAGCTTGTGTAATAATGTTTCTCATCACCTTGTCCAAGATCCTAAAGTTCTATTACTTAAATGGATACAACGTTAGCAGAAGAAACCCTCCAATTTTATTTGACATTCGAGGAGATTCTCCCTTTTCTGACGACGAGGAACAGGAACATGTTATCAGACAGCACTCCCTGTGGTTCAGCCCCACACAGGGTCTTCAACAATCAACCATAGACTCCATCACAGTTTACAGATACAGAAAAAACGAAGTTTTGGTTAAAGAAAGTGAGTGTCTTGTTTGCCTCGGTGAGTTTCAACAAGAAGAAAATCTGAGACTGTTGCCAAAGTGTAGCCATGCTTTCCATGTCTCTTGCATTGATACTTGGTTGAGGTCACATAAAACTTGTCCCTTGTGCCGCATCCCTATTGTTCGTGACGGTGGAAGTGACTCTGATTCCAGTGTTTCTGATATGATCGAGGACGTGGAAGAATGCCATAGTGGTGTTGGTGGTGAAGATTCTGGTGAAGAGGGAATTGAAATTTTGTCTGAATTTGGTGATTCTTCAGTTCCAATTTAG 795 0.4226 MLLVLNFFMTSFHSRKLLVPFHGSIDVAAMNRRIRSSYSPIASPLPSVVPRSFTWFPPPLLDGEHDHLNLASIIIIGLGSIACVIMFLITLSKILKFYYLNGYNVSRRNPPILFDIRGDSPFSDDEEQEHVIRQHSLWFSPTQGLQQSTIDSITVYRYRKNEVLVKESECLVCLGEFQQEENLRLLPKCSHAFHVSCIDTWLRSHKTCPLCRIPIVRDGGSDSDSSVSDMIEDVEECHSGVGGEDSGEEGIEILSEFGDSSVPI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03369 264 FunFam E3 ubiquitin-protein ligase ATL6 134 218 - -
Viun1g03369 264 SUPERFAMILY RING/U-box 158 218 - -
Viun1g03369 264 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 71 216 IPR044675 -
Viun1g03369 264 SMART ring_2 170 211 IPR001841 -
Viun1g03369 264 CDD RING-H2_EL5-like 169 212 - -
Viun1g03369 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 219 IPR013083 -
Viun1g03369 264 ProSiteProfiles Zinc finger RING-type profile. 170 212 IPR001841 -
Viun1g03369 264 Pfam Ring finger domain 169 212 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03369 Viun-Chr1 41039739 41040946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03369 135 216 C3H Transcription Factor Family AT5G10380 59.756 7.26e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03369 - - vun:114181230 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01055 3 6595638 6597187 Viun1g03369 1 41039739 41040946 PCT