Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun1g03367 | ATGAAGAAATCTTCTTACCCTAACCCCTCCCCGACGCCCCACGCCACTCATCGCCGCCTTGATTTTCACCCTAACACACCACCACACGGCGGTTCCACTCCCCGCCCCATCACCCACCGCCCCTTCCACCAATGGAGGCCGCGCTTACACCCACATGCGGCACGCCTCCACCGTCCGCCGGAGCCTTATTTCAAGGTGGAGCTCCGCCTCGGCCTCCGCCGTCCCAGCCGCGACGACATCGTGGCCCTGATCAAAGAATGCGAGCACAAACCGCAGTCTTTTACCTTTTACCCCGTCGACGACGTCGCTGCCGCGCTCAGTTACCGGAATTGGGAGGAGGCGTGCGACGCAGCCGCTTGGTTCTGGGAGTCGCTGCTGTTGGAGAAGCACGATTACACGCCGGAGATGGACTCCAACGTTTCGGTGACGGACAGTCTGGATGGTCGCCTTCGAGTGTTGTTCACGAGGCACGTGATGAAGGTGATGGAGGGGAAGGAGGTTAAGCGGTGGGTGGAGGAGAGTGAACGGTTGTCAAAGGAAATTGAGAGGGTTTCAACTTTGCTGGGTAAGCACTTGCATATTGACTTGAGTAACCACTATATTGAGCAGAGGAAAGGGCTCGTTGTTGAGAAAATCCAGGTTGAAAGGAGGTTGAAGGAGTTCGACTCTGCGATGGATTGTATACTGAAGTATCTGGCGGAGGACGCTGACGTGGAGGGTGCCGACGTGGAGGGTGATCGGAGTGTGAATGTGTTCAAGTTTGATGGATGTTTTGATTGGAAGCGCATTCACTGTCTGATCAGAAGGGAGTGTCGGAGACTGGAGGATGGATTGCCCATTTATGCTTACCGGAAGGATATTCTTCGGGAAATACATTATCAGCAGATGATGGTATTAATTGGAGAGACTGGTTCTGGAAAGAGTACACAGTTAGTTCAGTTTCTTGCTGATTCTGGCATTGGTGCCGATGAATCCATTGTATGCACACAACCTCGCAAGATTGCTGCCAAATCAGTGGCTCAACGGGTCCAGGAAGAAAGCAGTGGATGTTACGAAGGGCAGTCAATCAAATGTTCTACGTTTTCATCCATGAATGAGTTTGATTCCAGGATAATATTCATGACAGATCACTCTTTATTGCAGCACTACATGAGTGATAATAATTTGTCTGGGATCTCGTGCATCATAATTGATGAGGCTCACGAGAGGAGCTTAAATACAGATTTACTGATGACTTTGTTGAAGAATTTACTTTATAGGAGGGGTGAGATGCGGCTTATCATTATGTCTGCTACAGCTGATGCAAAACAGCTATCGGATTACTTTTATGGTTGTGGAATTTTTCGTGTGCATGGGAGAAGTTTTCCAGTGGATATCAAATATGCTCCTTCTGACCATGCTGGGTATTCTGGTTCTTCTGCTGTTGCCTCGTATGTTTCTGATGTTGTCAGAAAGGCAACCGAGGTTCATAGAACAGAGGAAGAGGGAACTATCCTTGCCTTTTTGACATCTCAGATAGAAGTAGAATATGCCTGTGAGAAGTTTCAGGTACCCTCTGCAGTTGCCCTGCCCTTACATGGAAAACTTTCATCTGAAGAGCAATTTCGTGTTTTTCAGAACTACCCTGGAAAGAGAAAAGTGATATTTTCAACAAATCTTGCTGAGACCTCACTGACAATTCCTGGTGTTAAGTATGTGATTGATTCTGGTTTAGTTAAAGACTGCAGATATGATCCTGGCAGTGGGATGAATGTACTTAAGGTTTGCTGGATTAGTCAGAGCTCTGCTGATCAACGGGCTGGTCGTGCTGGGAGGACTGAGCCTGGTGTGTGCTATAGGCTGTATTCAGAAACTGATTATCAATCAATGGACCTAAATCAAGAGCCAGAGATTCGGCGAGTTCATCTTGGTGTAGCAGTTTTGAGGATCCTGGCTCTAGGAGTGAAGAATATTCAGGATTTTGATTTTGTGGATGCTCCCAGTTCTAGCTCTATTGATATAGCAATCAGGAATCTAATTCAGTTACGAGCAATTGAGATGAAAAATGATGTTCTTGAATTAACGCCAGAGGGTTGGTGCCTGGTAAAATTGGGAATTGAACCCAGGCTTGGTAAACTTATTCTTGGCTGTTTCAAACATGGTTTGGGTAGGGAAGGTGTTGTTCTGGCTGCTGTGATGGCCAATGCTAGTAGCATATTTTGCAGAGTTGGCAGTGAATTTGAAAAGCGAAGATCCGATTGTCTTAAAGTGCAATTTTGCCATTGTGATGGTGACCTCTTTACTCTTCTCTCCGTGTACAAGGAATGGGAAGCTTTGCCTTTGGAAAGGAGGAACAGGTGGTGTTGGGAAAACAGCATCAATGCTAAGTCCGTGAGGAGGTGCCAAGACACAATTTTGGAGTTAGAAAGTTGCCTTGAGCGTGAACATAACCTCGTTATTCCTAGTTATTGGCTTTGGGACCCTTGTACACCCTCTAGTTATGATAAGAATTTGAAGAGGGTTATACTGTCCTCACTTGCTGAGAATGTAGCCATGTACTCTGGCTGTAATCAACTTGGTTATGAAGTGGCCCAAACTGGGCAACATGTTCAACTGCATCCATCATGTTCATTGCTTGTTTTTGCTCAGAAACCAAGTTGGGTGGTTTTTGGTGAGCTTCTTTCCATCTCTAATCAATATTTGGTCTGCGTGAGCACATTTGACTTTCAATCATTATATGACCTTTGCCCAGCTCCCTTGTTTGATGTATCTAAAATGGTGGAGCGGAAATTGCAAATGAAGACATTGTGTGGTCTTGGCTGTATTCTTCTCAAGAGATTTTGTGGAAAAGCCAATTGTAATTTGTTTGCTCTTGTTTCACGTATAAGGAAAGCTTGTGTGGATGAACGTATCTACATTGAAGTGAATGTTGACCAGAATGCAATCCACTTATTTGCCACTTCAAATGATATGGATACAGCCCTTGCGTTGGTTCATGACGCTGTAGAATATGAGAGAAAGTTGTTACGCGCTGAATGTATGGATAAGTTTTTGTATCATGGGTCTGGTATTCCGTCACCTATAGCTTTGTTTGGGTCTGGTGCTGAGATAAAACATTTGGAACTTGAGAAACGTTCCTTGAGTATTGAGGTGTGTCATGCAAACATAAATGCAATTGATGACAAGGAGCTCTTAATGTTTTTAGAGAAGAATACCTCTGGTAGCATCTGTGCTGTGCACAAATTTGCAGGCAATGTGAAGGATGAAGATAAAGAAAAGTGGGGCAGGATAATTTTTACGTCCCCTGAATTTGTCAAAAGAGCCACTGAACTAGATGGACATGAGTTTTGTGGCTCCTCCTTGAAAATTTTCCCTTCGCAGTTGGGAGGGGATAAAACATTTTCGTTCCCTGCTGTTAAAGCAAAAGTTTATTGGCCTCGTAGGCTTAGCAGGGGATTTGCCATAGTTAAATGTGATATAAAGGATGTCAATCATATGTTGAGAGATTTCTACAACCTTGCAATAGGGGGAAGGTATGTTCGATGTGAAGTTGGCAAAAAGAGTATGGACAGTGTTGTCATAAATGGGCTTGGCAAAGATCTCTCGGAAGCTGAAATACTGGATGTGCTAAGAACTGCTACAAGCAGGAGGATTTTGGATTTTTTCTTGGTGAGAGGGGATGCTGTTGAAAACCCACCATGCAGTGTTTTGGAGAAGGCACTGTTGAAGGAAATTTACCCCTCTTTGCCCAAAAAGGACCCGCACATTAGTTCTTGCCGAGTTCAGGTGTTTGTACCTGAGCCTAAGGATACCTTTATGAGAGCTTTAATCAGTTTCGATGGAAGATTGCATTTAGAGGCAGCAAAAGCTTTGGAGGATATTGAAGGAAAGGTGTTAGATGGATGTCTATCATGGCAAAAGATAAAGTGCCAGCGGTTGTTTCATAGCTCCTTGATATTTCCTACACCAGTGTTTCGTGTGATTAGGGAACAACTGGATGGAGTACTTGCAAACTTCAGGAATTTAAGAGGTCTTGAATGCAACCTGGACAGGACAGTTAATGGTTCCCACCGAGTCAAGATAACTGCGAACGCCACAAGGACAGTGGCAGAAGTTAGAAGACCTCTGGAAGAACTATGGAGAGGGAAAACCATTGAGCATGACAGTCTCACTCCTGCAGTTCTCCAGCTCATGATGTCCAAGGATGGGTTTAATCTTAAAAACTCATTGCAGCAGGAGACAGGAACTTATATTCTTTTTGACAGGCACAACTTGAATTTACGTGTGTTTGGTTCCCCAGACAAGGTTGCTTTGGCTCATGACAAGGTGATTCAATCCCTCCTCTCTCTCCATGAAGAAAAGCAGTTAGAAATCCATCTGAGAGGGAGGGATTTACCTCCTGATTTAATGAAGCAATTGATTAAAAAGTTTGGACCAGATCTGCATGGACTGAAAGAAAGGGTACCTGGGGTAGATCTTAAGCTCAACATAAGTCGCCATGTAATCAGTCTTAATGGTAGGAAGGAGTTGAAAACCAGGGTAGAGGAAATAATATTTGAGATTGCTCGTTCAAGCCATCATTTGGTTGGGACGTTTGATAATGATGGTCCTAATTGCCCGATTTGCTTGTGCGAGGTTGAGGATCCATTCCGGCTTGAAGGCTGTGGTCATTTGTTCTGCCGGTCGTGTCTGGTGGAACAATGTGAATCTGCTATTAAAAACCAAGACAGCTTCCCAATACGTTGTAGTCACAAGGACTGTGGAGATCTCATCCTGCTTACAGATCTTAGATCTCTCTTATTTAGCGATAAGTTGGAGGATCTTTTCAGGGCTTCATTGGGAGATTTTGTTGCTAAGAGTGGGGGAACTTACAGGTTTTGCCCTTCTCCAGACTGCCCCTCAATTTATCGAGTTGCAGATCCTGAGACTGCTGGTGAGCCATTTGTTTGTGGGTCTTGTTATTCAGAGATATGTAGCAGGTGCCACTTAGAGTATCATGCTTTCTTTTCATGCGAGAGATATAAAGAGTTTAAGGAAGAAGATCGATCTGTGATAGATTGGTCCAGAGGCAAGGACGATGTTAAGAGTTGCTTGGCGTGTGGGCTTGTAATTCAGAAGGTGGATGGGTGCAACCATGTTCTGTGCATGTGTGGAAAGCATGTGTGTTGGGTTTGCTTAGAGTTCTTCGGTGGTAGTGATGAATGTTATAGCCATTTGAGAAATGTGCACACGACTATAATATAA | 5223 | 0.4453 | MKKSSYPNPSPTPHATHRRLDFHPNTPPHGGSTPRPITHRPFHQWRPRLHPHAARLHRPPEPYFKVELRLGLRRPSRDDIVALIKECEHKPQSFTFYPVDDVAAALSYRNWEEACDAAAWFWESLLLEKHDYTPEMDSNVSVTDSLDGRLRVLFTRHVMKVMEGKEVKRWVEESERLSKEIERVSTLLGKHLHIDLSNHYIEQRKGLVVEKIQVERRLKEFDSAMDCILKYLAEDADVEGADVEGDRSVNVFKFDGCFDWKRIHCLIRRECRRLEDGLPIYAYRKDILREIHYQQMMVLIGETGSGKSTQLVQFLADSGIGADESIVCTQPRKIAAKSVAQRVQEESSGCYEGQSIKCSTFSSMNEFDSRIIFMTDHSLLQHYMSDNNLSGISCIIIDEAHERSLNTDLLMTLLKNLLYRRGEMRLIIMSATADAKQLSDYFYGCGIFRVHGRSFPVDIKYAPSDHAGYSGSSAVASYVSDVVRKATEVHRTEEEGTILAFLTSQIEVEYACEKFQVPSAVALPLHGKLSSEEQFRVFQNYPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDCRYDPGSGMNVLKVCWISQSSADQRAGRAGRTEPGVCYRLYSETDYQSMDLNQEPEIRRVHLGVAVLRILALGVKNIQDFDFVDAPSSSSIDIAIRNLIQLRAIEMKNDVLELTPEGWCLVKLGIEPRLGKLILGCFKHGLGREGVVLAAVMANASSIFCRVGSEFEKRRSDCLKVQFCHCDGDLFTLLSVYKEWEALPLERRNRWCWENSINAKSVRRCQDTILELESCLEREHNLVIPSYWLWDPCTPSSYDKNLKRVILSSLAENVAMYSGCNQLGYEVAQTGQHVQLHPSCSLLVFAQKPSWVVFGELLSISNQYLVCVSTFDFQSLYDLCPAPLFDVSKMVERKLQMKTLCGLGCILLKRFCGKANCNLFALVSRIRKACVDERIYIEVNVDQNAIHLFATSNDMDTALALVHDAVEYERKLLRAECMDKFLYHGSGIPSPIALFGSGAEIKHLELEKRSLSIEVCHANINAIDDKELLMFLEKNTSGSICAVHKFAGNVKDEDKEKWGRIIFTSPEFVKRATELDGHEFCGSSLKIFPSQLGGDKTFSFPAVKAKVYWPRRLSRGFAIVKCDIKDVNHMLRDFYNLAIGGRYVRCEVGKKSMDSVVINGLGKDLSEAEILDVLRTATSRRILDFFLVRGDAVENPPCSVLEKALLKEIYPSLPKKDPHISSCRVQVFVPEPKDTFMRALISFDGRLHLEAAKALEDIEGKVLDGCLSWQKIKCQRLFHSSLIFPTPVFRVIREQLDGVLANFRNLRGLECNLDRTVNGSHRVKITANATRTVAEVRRPLEELWRGKTIEHDSLTPAVLQLMMSKDGFNLKNSLQQETGTYILFDRHNLNLRVFGSPDKVALAHDKVIQSLLSLHEEKQLEIHLRGRDLPPDLMKQLIKKFGPDLHGLKERVPGVDLKLNISRHVISLNGRKELKTRVEEIIFEIARSSHHLVGTFDNDGPNCPICLCEVEDPFRLEGCGHLFCRSCLVEQCESAIKNQDSFPIRCSHKDCGDLILLTDLRSLLFSDKLEDLFRASLGDFVAKSGGTYRFCPSPDCPSIYRVADPETAGEPFVCGSCYSEICSRCHLEYHAFFSCERYKEFKEEDRSVIDWSRGKDDVKSCLACGLVIQKVDGCNHVLCMCGKHVCWVCLEFFGGSDECYSHLRNVHTTII | 1740 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun1g03367 | 1740 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 271 | 784 | IPR027417 | - | |
| Viun1g03367 | 1740 | FunFam | ATP-dependent RNA helicase DEAH12 chloroplastic | 1660 | 1737 | - | - | |
| Viun1g03367 | 1740 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 288 | 451 | IPR014001 | - | |
| Viun1g03367 | 1740 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1528 | 1607 | IPR013083 | - | |
| Viun1g03367 | 1740 | CDD | DEXHc_RHA-like | 295 | 450 | - | - | |
| Viun1g03367 | 1740 | SUPERFAMILY | RING/U-box | 1528 | 1593 | - | - | |
| Viun1g03367 | 1740 | SUPERFAMILY | RING/U-box | 1684 | 1733 | - | - | |
| Viun1g03367 | 1740 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1715 | 1736 | IPR013087 | - | |
| Viun1g03367 | 1740 | Pfam | DEAD/DEAH box helicase | 285 | 438 | IPR011545 | GO:0003676|GO:0005524 | |
| Viun1g03367 | 1740 | ProSiteProfiles | Zinc finger RING-type profile. | 1532 | 1575 | IPR001841 | - |
Showing 1 to 10 of 37 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun1g03367 | K12818 | - | gmx:100810008 | 2893.22 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Viun1g03367 | 1 | 41029797 | 41036527 | Viun1g03367 | 1 | 41029797 | 41036527 | ECH |
Showing 1 to 1 of 1 entries