Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03335 ATGTGCGGAATCCTCGCAGTGTTGGGTTGCGTCGACAACTCTCAGGCCAAGCGCGCTCGCATCATCGAATTGTCTCGCAGGTTGAGGCATAGAGGTCCTGATTGGAGTGGCATACATTGCCATGATGATTGTTACCTTGCTCATCAAAGGCTTGCTATTGTTGACCCTACTTCAGGGGATCAACCTTTGTACAACGAAGACAAGACTGTTATTGTCACCGTAAATGGGGAGATATACAACCACAAAGAATTGAGACAGAAACTGAGTTCTCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAATATGGGGAGGAATTTGTTAACATGCTGGATGGGATGTTCGCCTTTATTCTTCTTGATACTCGAGATAAAAGTTTCATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTATTTGGGCTGGGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGAGTGATGATTGTGAGAGATTCATGTCATTTCCTCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCAACATGGTTTTCGGAGAATGTTCCATCAACTCCCTATGATCCAATAGTTTTGCGTGAGACCTTCGAGAGGGCTGTGGTTAAGAGAATGATGACTGATGTACCCTTTGGAGTTCTTTTGTCCGGAGGATTAGACTCATCACTTGTTGCTTCTGTGGTCAATCGTTATTTGGCGGAATCTGAGGCAGCTCGTCAATGGGGATCACAGTTGCATACTTTCTGCATTGGTTTAAAGGGCTCTCCGGACTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACCACGAACTTTATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACGACTATCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGGAAAATTAAAGCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGCGGTTACCTGTATTTTCATAAGGCACCTAACAAGAAAGAGTTTCACGAAGAAACTTGTCGAAAAATCAAAGCTCTCCATCTTTATGACTGCCTTAGAGCCAACAAGTCAACTGCAGCATGGGGAGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCGACGTAGCAATGAGTATGGATCCCGAGTCGAAAATGATAAGGCGTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGATGAAAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGGGTTGGTTACAGTTGGATTGATGCCTTGAAGGATCACGCTGATAAACAAGTTCCAGATGCAACAATGCTTGCTGCCAGTTTTATTTACCCTGAAAACACTCCTACTACTAAAGAAGGATACCTCTACAGGACAATTTTTGAGAAGTTCTTTCCAAAGAATGCAGCAAGGGCAACAGTTCCAGGGGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCCAAAAATCTTGACCCATCTGGTCGTGCAGCGCTTGGTGTTCATGAAGCTTCATATGAGCATGTAGTGGATACCAAACTTGACAAACCCAAAAATGGACCAATTTCGAAGGTCCATAGTTGA 1728 0.43 MCGILAVLGCVDNSQAKRARIIELSRRLRHRGPDWSGIHCHDDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKELRQKLSSHQFRTGSDCEVIAHLYEEYGEEFVNMLDGMFAFILLDTRDKSFIAARDAIGITPLYLGWGHDGSTWFASEMKALSDDCERFMSFPPGHIYSSKQGGLRRWYNPTWFSENVPSTPYDPIVLRETFERAVVKRMMTDVPFGVLLSGGLDSSLVASVVNRYLAESEAARQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFIDVAMSMDPESKMIRRDLGRIEKWVLRNAFDDEKNPYLPKHILYRQKEQFSDGVGYSWIDALKDHADKQVPDATMLAASFIYPENTPTTKEGYLYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHEASYEHVVDTKLDKPKNGPISKVHS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03335 575 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Viun1g03335 575 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Viun1g03335 575 PIRSF Asn_synthetase_glu-h 357 517 IPR006426 GO:0004066|GO:0006529
Viun1g03335 575 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Viun1g03335 575 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 210 484 - -
Viun1g03335 575 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Viun1g03335 575 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Viun1g03335 575 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Viun1g03335 575 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Viun1g03335 575 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Viun1g03335 575 Gene3D HUPs 195 514 IPR014729 -
Viun1g03335 575 Pfam Asparagine synthase 210 511 IPR001962 GO:0004066|GO:0006529
Viun1g03335 575 PANTHER ASPARAGINE SYNTHETASE 1 555 - -
Viun1g03335 575 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03335 Viun-Chr1 40812545 40816597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03335 69 164 PRT Gene Family AT2G16570 33.962 1.64e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03335 K01953 - gmx:732660 1109.75