Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03309 ATGTGCAGGAACTCTAGTAACTCAGAGATGGTAGCTTCAAACAAAAGCACGTTAGAAGAGGTTTTGGACATTGAGACCAACATGTCTCATCAGTCTCAGTGGGTGCTAAATCCTCCAGATCCACCCTCCATGCTGCGTCAGGTTCTGGACAACGTCAAGGACATCCTCTTACCACATTCTCAACCAAACACATTCTCTTCTCTCAGGAACCAGCCCTTTTCCAAACGCGCTTTTGCTTTCTTCCAGAACGTGTTTCCCATTCTTGCTTCATTCCAAGACTACAATGCTCAAAAGTTCAAGTGCGATTTCATGGCCGGGCTAACCCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCAACATTGGCGCAGCTAAGTCCAGAATATGGCCTCTATACAGGAATTGTTCCACCTCTTATTTATGCTTTGCTAGCGAGTTCAAGGGAAATAGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCCTCAATGATTCAGACATTGAAACTTCCGATTCATGATTCTATTGAATACAATAAGCTTGTTTTCACTGTCACATTTTTTGCTGGCATCTTTCAAGTTGCTTTCGGCCTCTTTAGGTTTGGTTTTCTGGTGGAATATATTTCCCAATCGACGATCGTAGGGTTCTTGGCAGCAGCTGCAGTGGGCATTGGACTACAACAACTGAGAGGATTATTCGGGATCGTTAACTTCACCAACAAAACTGCTTTATTTTCCGTCCTCAAATCTCTTTGGACATCCTTCAAAAACCAATCAGCGTGGCATCCCTACAACTTCGTTATTGGATTCTCCTTCCTATGCTTCATCCTATTCACCAGATTCCTGGGTAAAAGGAACAAGAAACTTATCTGGTTGTCACACGTTGCTCCTCTCCTTTCTATTATCGTATCCTCTATCATTGCGTACAAAATAAATGTGGACAAGCCTCAAATGAAGGACTACAGAGTTGAAGTGTTGGGACCAATCAAAGGAGGAGGTAGCTTGAATCCAAGCTCCTTCAATCAGCTAACATTTGATAGCAAAGTTGTGGGTCATTTGATGAGAATAGGCTTGACCATTGCTATTATTTCACTCACGGGATCTATTGCTGTGGGACGATCATTTGCATCTCTAAAAGGACACAGCATTGATCCCAACAGAGAAGTGGTGTCGTGGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGGTCTTTGTCACGAACTGCTGTGAACTACAATGCAGGGTCAGAAACAATGGTGTCGAACATAGTGATGGCACTCACCGTGCTGTTGTCACTTAAATTTTTGACAGGGCTTTTGTATTTCACTCCGAAAGCAATCTTAGCAGCAATAATTCTTTCGGCTGTTCCAGGACTGATTGACCTAAAAAAAGCTTGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCCTTCTTCGGAGTCTTGTTTGCTTCTGCGGAAATAGGCCTCGCAGTTGGGTGCAGATCACGATTTCATTCGCGAAGATAA 1548 0.4309 MCRNSSNSEMVASNKSTLEEVLDIETNMSHQSQWVLNPPDPPSMLRQVLDNVKDILLPHSQPNTFSSLRNQPFSKRAFAFFQNVFPILASFQDYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSREIVIGPGSVDSLLLSSMIQTLKLPIHDSIEYNKLVFTVTFFAGIFQVAFGLFRFGFLVEYISQSTIVGFLAAAAVGIGLQQLRGLFGIVNFTNKTALFSVLKSLWTSFKNQSAWHPYNFVIGFSFLCFILFTRFLGKRNKKLIWLSHVAPLLSIIVSSIIAYKINVDKPQMKDYRVEVLGPIKGGGSLNPSSFNQLTFDSKVVGHLMRIGLTIAIISLTGSIAVGRSFASLKGHSIDPNREVVSWGIMNIVGSLTSCYIASGSLSRTAVNYNAGSETMVSNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLKKACEIWKVDKMDFLACAGAFFGVLFASAEIGLAVGCRSRFHSRR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03309 515 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Viun1g03309 515 NCBIfam sulfate permease 86 508 IPR001902 GO:0016020|GO:0055085
Viun1g03309 515 PANTHER SULFATE TRANSPORTER 65 507 IPR001902 GO:0016020|GO:0055085
Viun1g03309 515 Pfam Sulfate permease family 99 488 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03309 Viun-Chr1 40672178 40678293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03309 4 506 Inorganic Solute Cotransporters AT5G10180 52.465 2.83e-176 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03309 K17469 - gmx:100817841 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03309 1 40672178 40678293 Viun1g03309 1 40672178 40678293 ECH
Viun1g03309 1 40672178 40678293 Viun9g01892 9 28779686 28781100 ECH