Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03282 ATGGATTGTTGCGTGTGTACGACGATGCCACTGATACTAAGGCCTCCGAGGAATACAATATGTGGTGCATGTTACGAAGGAGTAAGGAGCATAATCAACATGATGAGCAATTTCGAAACTGAGAAAGTAAAACCAACAATGGCCAATCCAAATCCAAACCCTTCTCCAGTTTCGCGAAGAAATTCGAGTAAGACACTTGATGATTGCATAAGATGGTGTTCAGAGCATATAGAAGAGTTTAATGAACAGAAGGAAGACTTGGTTTTTCTGAGAGGCTTCGTTGCAGCCTTCAAAACACAGATTCACACAGATATATTGGTCACACCAGGAAGACACGGTCCACCTATCCCCGCACATAAGTCCATTTTGGCTGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGCGACGAATGCAAAGAAGCACCGAGTAAGAGCATAACTATACCCGATCTGAAGCATGAAGAACTTGAGTGTCTTCTTGAGTTTCTGTACAGTGGAAGATTGGGTGAGGAAAAATTGGAGAAACATGTGTACGCGTTGTCACAAGCAGCGGATAAGTATGTGATCCCACATTTGCTGAAACACTGCGAACGCTACCTTCTGAGTTCGCTAAGCACTTGCAATGGCCTTGAGACACTTGAGATTGCAGACACTTGTTCCAACCACAAGTTGAAGGAGACAACCTTGGATTTCTTGGTTAAGAACATTGACCGTGTTGTGTCCTCACCCAAATTTGAAGCTTTTGTTCACAGGAGCCCGCACCTTACTGTGCAACTGGTTACAAGGGCCTTTGTCAATGGTGCTAAATGA 813 0.4354 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNFETEKVKPTMANPNPNPSPVSRRNSSKTLDDCIRWCSEHIEEFNEQKEDLVFLRGFVAAFKTQIHTDILVTPGRHGPPIPAHKSILAARSEIFKNMLECDECKEAPSKSITIPDLKHEELECLLEFLYSGRLGEEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTCNGLETLEIADTCSNHKLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTRAFVNGAK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03282 270 ProSiteProfiles BTB domain profile. 103 173 IPR000210 GO:0005515
Viun1g03282 270 SUPERFAMILY POZ domain 89 203 IPR011333 -
Viun1g03282 270 Gene3D Potassium Channel Kv1.1; Chain A 74 206 IPR011333 -
Viun1g03282 270 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 269 IPR044784 -
Viun1g03282 270 SMART BTB_4 103 205 IPR000210 GO:0005515
Viun1g03282 270 Gene3D - 207 268 - -
Viun1g03282 270 MobiDBLite consensus disorder prediction 44 63 - -
Viun1g03282 270 Pfam BTB/POZ domain 100 204 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Viun1g03282 BTB 2.4e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03282 K10523 - gmx:100777561 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03282 1 40464962 40466316 Viun1g03282 1 40464962 40466316 ECH