Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03280 ATGTTTCCGACCGTGGGAGTCAGCGTCCCACTATTGGGCGAGTCCGATGGAGCGATGCCGCCGGCGTCTGTTCCCGGAGCGGTGTTCAACGTGGCGACGAGCATAGTCGGCGCCGGAATCATGTCAATTCCGGCAATAATGAAGGTTCTTGGCGTGGTTCCCGCTTTCGCCATGATTATCGTTGTGGCCGTGCTCGCGGAACTCTCTGTCGAGTTCCTCATGCGTTTCACGCACTCCGGTGAAACGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGATCGCCGGGAGCGTTGGCCGCGCAAGTTTGCGTCATCATCACCAACGTTGGGGGCTTAATTCTTTACCTGATCATCATCGGGGATGTGCTATCTGGAAAGCAAGATGGAGGGGAAGTGCATTTGGGTATTCTGCAACAGTGGTTTGGTATTCATTGGTGGAATTCTCGGGAGTTTGCTCTTCTCTTTACTTTGGTCTTCGTCATGTTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTGGCTATTTTTGCACTGGTGCAAGGAAAGACGCAGACTCCTAGATTGTTTCCTCGTTTGGACAACCAAACCTCATTCTTTGATCTATTTACTGCAGTTCCTGTTGTTGTCACAGCTTTCACATTTCATTTTAACGTGCATCCAATTGGGTTTGAGTTTGCCAAGCCATCTCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACATCTCAGTAGGCCTATTCGGGTACCTATTATTTGGGGATTCAACACAATCAGACATTCTCATCAATTTTGACCAGAGTAATGATTCTGTGGTTGGTTCCTTGTTCAATACTTTGATCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTCTTGAACTTCTCTTTGAGATCCAACATAGATGAAGTTCTCTTCCCCAATAAGCCTATGCTAGCCACAGACAACAAAAGATTCATGATCCTCACTGTGGTGCTGCTTGTATTCTCCTACCTTGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTTGGATCAACATCGGCAGTGTGCCTTGCCTTCATTTTCCCTGGCTCTATTGTTTTACGGGATGCATGTGGTATATCAACGAAAAGGGATAAAATTATTGCTCTGATCATGATTATACTTGCCGTGGTGACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1311 0.4622 MFPTVGVSVPLLGESDGAMPPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPAFAMIIVVAVLAELSVEFLMRFTHSGETTTYAGVMREAFGSPGALAAQVCVIITNVGGLILYLIIIGDVLSGKQDGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMFPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAIFALVQGKTQTPRLFPRLDNQTSFFDLFTAVPVVVTAFTFHFNVHPIGFEFAKPSQMTTAVRLALLLCAVIYISVGLFGYLLFGDSTQSDILINFDQSNDSVVGSLFNTLIRVSYALHIMLVFPLLNFSLRSNIDEVLFPNKPMLATDNKRFMILTVVLLVFSYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGSIVLRDACGISTKRDKIIALIMIILAVVTSVLAISTNIYNAFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03280 436 PANTHER AMINO ACID TRANSPORTER 18 419 - -
Viun1g03280 436 Pfam Transmembrane amino acid transporter protein 22 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03280 Viun-Chr1 40454045 40456526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03280 10 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.333 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03280 - - gmx:100815694 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03280 1 40454045 40456526 Viun1g03280 1 40454045 40456526 ECH
Viun1g03280 1 40454045 40456526 Viun8g02405 8 33835132 33838397 PCT
Viun8g02406 8 33841607 33844003 Viun1g03280 1 40454045 40456526 PCT