Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03219 ATGGCTCATTTCATGGGTGATGCAACAAGTTTTTGTTGGGCCGTGGACAGTGCCATAAGTAGTGAGAGCGCCTCAAATCTGGGAGCATCCCCTCCCCATAGTTTTACTTCGGTGGTGGACAATGCATTGAGAAGTAGTTCTGCTTCTGAAGCAAATTTTCTCCCCAGCTTCACTTCGGAGGAGGACAATGTGATAAGGAGTAGTAATGGAGAAAGAACAGACGTGCGCGTTGAAGGGTCATCACCAGTGGCGTCCAATTACACAGAAAATGTTGTTAAAGGCTTCCAATTATTCCGCAAGGCTGAGCTTGTAGCAGCGACCAACAACTTCTCACTTGAGAACAAGATTGGTGGTGGTGCTGTGTTCATAGGCAAACTCCTTGATGGTCGTGAGGTTGCAATCAAGAGGGGACCAAAGAGAAAGACCCCATTTGAGTCTGAATTGGCCTTCTTGTCTCGCCTACACCACAAGCACTTGGTTGGACTAGTTGGGTTCTGCGAAAGGAGACATGAGAAGCTCTTAGTGTATGAGTACATGAAGAATGGTTCATTGTATAATCATTTGCACGAGAAGAAGAATGTGGAGAAGGGTAGCAGTGTGTTGAATGATTGGAAAATGAGGATAAAAATTGCTTTGGATGCTTCCCGGGGAATACAATATCTTCATAATCATGCAGTTCCATCAATTATTCACAGAAACATAAAGTCTTCTAACATTCTTATTGATGCTAGTTGGACGGCAAGAGTATCAGGGTTTGGATTGTGTTTGATGAGTTCAGAAGTTGAGCGTCACCAACAAATAGAAGGAAACGTTGGATACATTGACCCTGAGTACTACGGTTTAAATGTATTGACGACAAAGAGTGATGTGTATGGGTTTGGAGTTGTACTGTTGGAACTTTTAACAGGAAAGAGAGCTATATTCAGGTATGGCGAAGATGGAGGCAACCCAGGGACAATATTTGGAAGTTTTAGGAGTGTAGTGGACTTTGCGGTGCCTCGTATTTCGGGCGGAGAATTCATGGAAATTTTGGATCCAAGGGTTGGACCACCTGGTGTGGACGAGACAGAGGTAGTGGAATTGTTGGCCCATATAGCTATCAATTGTGTGAACAGGAAAGGCAAAGATAGACCATCCATGGCTCACATTTTGGTCCAGTTAGAGAGGAGAGTTTCGTATTTTCAATCTATACTTTAG 1197 0.4378 MAHFMGDATSFCWAVDSAISSESASNLGASPPHSFTSVVDNALRSSSASEANFLPSFTSEEDNVIRSSNGERTDVRVEGSSPVASNYTENVVKGFQLFRKAELVAATNNFSLENKIGGGAVFIGKLLDGREVAIKRGPKRKTPFESELAFLSRLHHKHLVGLVGFCERRHEKLLVYEYMKNGSLYNHLHEKKNVEKGSSVLNDWKMRIKIALDASRGIQYLHNHAVPSIIHRNIKSSNILIDASWTARVSGFGLCLMSSEVERHQQIEGNVGYIDPEYYGLNVLTTKSDVYGFGVVLLELLTGKRAIFRYGEDGGNPGTIFGSFRSVVDFAVPRISGGEFMEILDPRVGPPGVDETEVVELLAHIAINCVNRKGKDRPSMAHILVQLERRVSYFQSIL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03219 398 Gene3D Phosphorylase Kinase; domain 1 73 178 - -
Viun1g03219 398 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03219 398 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 86 392 IPR044815 GO:0004674
Viun1g03219 398 Pfam Protein tyrosine and serine/threonine kinase 129 387 IPR001245 GO:0004672|GO:0006468
Viun1g03219 398 SUPERFAMILY Protein kinase-like (PK-like) 87 388 IPR011009 -
Viun1g03219 398 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03219 Viun-Chr1 40045520 40047009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03219 98 389 Receptor kinase-like Gene Family AT3G55950 60.127 1.22e-111 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun1g03219 PK_Tyr_Ser-Thr 8.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03219 - - vun:114193227 468.774