Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g03218 | ATGACTCATTTGATGACAAGTTTTTGTTGGGCTGTGGACAGTGCCATAAGGAGTGAGACTGCGTCAAATTCGGGATCATCCCCTGTCCATAGTTTTGCTTCGGTAGTGGACTATGCATTGAGAAGTAGTTCTGCTTCTGAACCAGATTTGGGAACGTCCCGTGTCCCCAGTTTTGGTTCGAGAGTGGACTATGTGATCAGTAGCAGTGATGGAGAAAGAACAGATGTGCGCGCTGAAGGGTCATCACGAGAGGCGTCCAGTGTCACAGGAAATCTTGTAAGAGGCTTCCAATTATTCAGCAAGGCTGAGCTTGTAGCAGCGATCAACAATTTCTCACTTCAGAACAAGATTGGTGGTGGTGCAGCGTACATAGGCAAACTCCTTGATGGTCGTGAGGTTGCAATCAAGAGGGTTGAAAGAATGATCTCAATTAAATCTAAATTGGCTATCTTGCCTCGCCTACACCACAAGCACTTGGTTGGACTAGTTGGGTTCTGCGAAGAGAAAGACGAGACGCTGTTGGTGTACGAGTACCTGAAGAATGGGGCGCTGTATGATCATTTGCACGAGAAGAAGAATGTGGAGAAGGGTAGCAGTGTGTTGAATGATTGGAAAATGAGGATAAAAATTGCTTTGGATGCTTCCCGGTGTATAGAATATCTTCATAATGCAGTTCCATCAATTATTCACAGAGACATAAAGTCTTCTAACATTCTCATTGATGCTACTTGGACGGCAAGAGTATCAGATTTTGGATTGTCTATGATGAGTCCAGAACCTGACCGTGATCACCGACCAATGAAGGCAGCAGGAACCGTTGGATACATTGATCCTGAGTACTACGGTTTAAATGTATTGACGGCAAAGAGTGATGTGTATGGACTTGGAGTTGTACTGCTGGAACTTTTAACAGGAAAGAGAGCTATATTCAAGTATGGCGAAGATGGAGGCATATTTGGAACTTTTATGAGTGTGGTGGACTTTGCAGTGCCTCGTATTTTGGCTGGAGAATTGGTGAAAATTTTGGATCCAAGGGTTGGACCACCCGACGTGAATGAGGCAGAGGCAGTGGAATTAGTGGCCTATATAGCCCTCCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGACTGACATTGTGAACAATTTAGAGAGGGCTTTGGCTATTTGA | 1176 | 0.4456 | MTHLMTSFCWAVDSAIRSETASNSGSSPVHSFASVVDYALRSSSASEPDLGTSRVPSFGSRVDYVISSSDGERTDVRAEGSSREASSVTGNLVRGFQLFSKAELVAAINNFSLQNKIGGGAAYIGKLLDGREVAIKRVERMISIKSKLAILPRLHHKHLVGLVGFCEEKDETLLVYEYLKNGALYDHLHEKKNVEKGSSVLNDWKMRIKIALDASRCIEYLHNAVPSIIHRDIKSSNILIDATWTARVSDFGLSMMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKYGEDGGIFGTFMSVVDFAVPRILAGELVKILDPRVGPPDVNEAEAVELVAYIALHCVNLEGKDRPTMTDIVNNLERALAI | 391 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g03218 | 391 | SUPERFAMILY | Protein kinase-like (PK-like) | 90 | 385 | IPR011009 | - | |
Viun1g03218 | 391 | Coils | Coil | 382 | 391 | - | - | |
Viun1g03218 | 391 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 83 | 390 | IPR044815 | GO:0004674 | |
Viun1g03218 | 391 | Pfam | Protein kinase domain | 123 | 383 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g03218 | 391 | Gene3D | Transferase(Phosphotransferase) domain 1 | 179 | 390 | - | - | |
Viun1g03218 | 391 | ProSiteProfiles | Protein kinase domain profile. | 111 | 389 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun1g03218 | 391 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 228 | 240 | IPR008271 | GO:0004672|GO:0006468 | |
Viun1g03218 | 391 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 178 | - | - | |
Viun1g03218 | 391 | SMART | serkin_6 | 111 | 389 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g03218 | Viun-Chr1 | 40040391 | 40041796 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g03218 | 99 | 389 | Receptor kinase-like Gene Family | AT3G55950 | 65.924 | 5.06e-124 | 375 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Viun1g03218 | Pkinase | 5.7e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g03218 | - | - | vun:114193227 | 473.781 |