Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03217 ATGGCTGATTTCACTGCGGATGATGCAACAAGTTTTGGTTGGGCTGTGGACAATGCCATAAGGAGTGAGACTGCGTCAAATTTGGGAGCATCCCCTGCCCATAGTTTTGCTTCGGTAGTGGACTATGCATTGAGAAGTAGTTCTGCTTCTGAAGCAGATTTGCACCCCAGTTTTGGTTCGAGAGTGGACTATGTGATAAGGACTAGTAATGGAGAAAGAACAGGTGGGCGCGCTGAAGGGTCATCACCAGAAGCTTCCAATGTCACAGAAAATGTTGTTAAAGGCTTCCAATTATTCAGCAAGGCTGAGCTTGTAGCAGCGACCAACAATTTCTCACTTGACAACAAGATTGGTGGTGGTGCTGTGTTCATAGGCAAACTCCTTGATGGTCGTGAGGTTGTAATCAAGAGGGGTCAAAAGGCCTCAATTAAATCTAAATTGGCCTTCTTGTCTCGCCTACACCACGAGAACTTGGTTGGACTAATTGGGTTCTGCGAAAGGAGACATGAGAAGCTCTTAGTGTATGAGTACATGAAGAATGGTTCATTGTATGATCATTTGCATGAGAAGAAGAATGTGGAGAAGGGTAGCAGTGTGTTGAATGATTGGAAAATGAGGATAAAAATTGCTTTGGATGCTGCCCGGGGAATACAATATCTTCGTAACCATGCAGTTCCTTCAATTATTCACAGAAACATAATCTCTCCTAATATTCTTATTGATGCTACTTGGACGGCAAGAGTATCAGTATCAGACTTTGAATTGTGTTTGATGAGTTCAGAAGTTGACCGTGATCACCCACTTGGATACGGTTTAGATGTATTGACGGGAAAGAGTGATGTGTATGGGTTTGGAGTTGTACTGCTGGAACTTTTAACAGGAAAGAGAGCTATATTCAAGTATGGCGAAGATGGAGGCATATTTGGAACTTTTATGAGTGTGGTGGACTTTGCAGTGCCTCGTATTTTGGCCGGAGAATTGGTTGAAATTTTGGATCCAAGGGTTGGACCACCTGATGTGGACGAGGTAGATGCAGTTGAATTATTGGCCTATTTAGCTATCGATTGTGTGAATTGGAAAGGGAAAGATAGACCAACCTTGTCTGTCATTTTGGTCCATTTAGAGAGGAGAGTTTCGTATTTTGAATCTATACTTTAG 1158 0.4266 MADFTADDATSFGWAVDNAIRSETASNLGASPAHSFASVVDYALRSSSASEADLHPSFGSRVDYVIRTSNGERTGGRAEGSSPEASNVTENVVKGFQLFSKAELVAATNNFSLDNKIGGGAVFIGKLLDGREVVIKRGQKASIKSKLAFLSRLHHENLVGLIGFCERRHEKLLVYEYMKNGSLYDHLHEKKNVEKGSSVLNDWKMRIKIALDAARGIQYLRNHAVPSIIHRNIISPNILIDATWTARVSVSDFELCLMSSEVDRDHPLGYGLDVLTGKSDVYGFGVVLLELLTGKRAIFKYGEDGGIFGTFMSVVDFAVPRILAGELVEILDPRVGPPDVDEVDAVELLAYLAIDCVNWKGKDRPTLSVILVHLERRVSYFESIL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03217 385 Gene3D Transferase(Phosphotransferase) domain 1 178 382 - -
Viun1g03217 385 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 87 379 IPR044815 GO:0004674
Viun1g03217 385 Gene3D Phosphorylase Kinase; domain 1 75 177 - -
Viun1g03217 385 SUPERFAMILY Protein kinase-like (PK-like) 90 375 IPR011009 -
Viun1g03217 385 Pfam Protein tyrosine and serine/threonine kinase 138 297 IPR001245 GO:0004672|GO:0006468
Viun1g03217 385 ProSiteProfiles Protein kinase domain profile. 68 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03217 Viun-Chr1 40035467 40036662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03217 99 376 Receptor kinase-like Gene Family AT3G55950 56.369 3.63e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun1g03217 PK_Tyr_Ser-Thr 9.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03217 - - vun:114193227 424.091