Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03205 ATGGATCCAGGAACGGAAGATCAATACTTAAAACGACGCGTAACTACAGGATGTTACGACGTAGATGTTTCAAATGCAAATGAAATATGGAAAAGTGAAACCGTTCTCTTCTTTTACCTTCCTACCTTGGCAGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTGTTTTGTACTACATCCTCAAACCCTTAAACCAACCACGTCTTGTTTCTGAGATTTTGGCAAGTGCATCATCTATTCCTCTGTTAGCTTCTTTCAATGCTCATATACTTGAATTTCAATATCATGCATCCAAACTACATGCATACATACATGATTACAAACAAAAACAAACTTTAGATGTGATGGGTATTCTGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGAGGTTCTCACCCCTTTGAAGTCAATCCTAACAACTGAAACAATATCATACGTGGGACTCATTTACACTGTCTTCCTGGCTGGTTTGGACATGAATTTTGACACAATTCTACGAGGAAGAAAGAAGGCCACAAGCATTGCCATTGCTGGCGTTTTGATTCCAATGTTATGTGGGGGTATCATACATGCTTTGGCTCTAAAATTGTACAAGGGACCTCCAGAGTATTGGGCAAATTTCGGCACGCCAAAGGCTTATATGTTTTGGACCTTAACTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATTCTTGCAGATCTCAAGCTCCTCTACACGGGACTTGGCAGAGTGACCTTAACAACAGCCATGATCAGTGACTTCTATAATTGGGTCATGTTTGCAATGTTGGTTCCATTTGCCATAAACGGTGGAAGTGCCATATACTCGGTGCTGAGCACTATAGTTTATGTGCTTTTCTGCTTCATTCTTATTCGTCCTTATTTGGTAGAGATAATAGTGCGCAAAACGAATCAGAATGAGTGGGACAATAATGGGTTGTTCATTGTGGTCATGGGAGCATATGCTTCTGCAGCGGTCACGGATCTGCTAGGGACACACCCTGTTGTTGGGGCTCTGGTTTATGGAATAATGATACCTCGTGGTAAATTTACTCACTTGCTCATAGAGAAATCAGAGGATTTTGGAGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGGCTCAGAATAATATATGTCATAAAAACTCAAGGTTTGGGCCTGGTGCTGTTCATTTTGTTCCTCTCAATCCTCCCCAAGATTTTAAGCACTGTAATAGCCACTCAGTTTTATGGTATGTCTGTTCTTGATGGTGTGTCTATTGGACTACTAATGAACACCAAAGGCCTCCTACCAATATTAATGCTCAACAGTGCCTGGGACAAACAGATTCTGAGTGTGGAGTCCTTCTCAATTTTGACAATAGCTGTTTTAGTAATGACCATGGTGGTGCCTCTTGTCATCAACGCTATATACAAGCCAAGAAAGCTATACAAACAAAACAAACTCAAGACCCTACAAAACTTAAAGGCCGAAGCAGAACTGCGTATATTAGCTTGTGTTCACAACCCTAGGCAAGCCACAGGAATGATCAACATTCTTGAAGCATACCACACCACAAAACTCCCTCCTCTACGTGTGTTTGCACTTCAGCTTGTTGAACTAACGGGACACACAGCTTCCCTTTTTGTTTCCCATGTGAATCAGCACAACCCACAGCAAAGTGTTGGTGCACAAGCCCTCACCAAGGCACAGGAAGACTTAGAAAGCATCACAAACATTTTCCAAACATACGCAGCTATAAACGAGAGCAATAACGTGGAGACCATTGCAGCTGCATCCTCCTATTCAACCATTCACGAGGACATATACAACGTGTCACAGGAGAAACAAGCCAACCTCATTCTCCTTCCCTTCCACAAACAATCAAACATAGAAGGCATTCTGGAGACAGCCAACACTGCATTCCAAGAAATAAACCGCAATGTGATGAGAGATGCACCGTGCACTGTGGGAATCTTTGTTGACCGAGGACTTGCCTCATTGTTCAAAGTGAACTTGCGAGTGGTGATGGTTTATGTCGGTGGCCCTGATGACCGTGAAGCCTTGGCCGTTGCATGGAGGATGTCAAAGCATCAAGGGGTGCAACTGTCTGTGGTGAGGATCCTTTTGTTTGGTGATGCTGCAGAGATTGATGTGATGTCACATGTTGAGAATCATGGACTGTTATCTGTGATAGTGGACAGTGAGAAGCAGAAGGAGTTGGATGATGAGTATATGAGTGCATTCAGACTGAAAGCAGTGAGCAATGAGGATTCTATAAAGTATTCGGAGAAAGAAGTTCGAAGTCGTGATGATATTCCTGAAGTGCTTAATGAGATTGATCAAGTTGGTTATGATTTGTATATTTTGGGACAAGGAGGAGGTAGAAACTGTTTGATATTATCGGAGTTGATGAAATGGACAGATTGTCCGGAACTTGGTGTGGTAGGGGACATTGTGGCATCGAATAATTTTGGTTCAAGCTCTTCACTGCTAATTATACAGCAATATGGGTTTGGGGGAATGGTGTTTGAGAACAATAATACGACACAGCAGCCTAAGGAAGCAGTGGGTTCAAACATTGAAGATCCTGGGCCAGTTTTTGTGAAGGTACAATGGCATCAGTGA 2631 0.4238 MDPGTEDQYLKRRVTTGCYDVDVSNANEIWKSETVLFFYLPTLAAQVAFMLLSTRVLYYILKPLNQPRLVSEILASASSIPLLASFNAHILEFQYHASKLHAYIHDYKQKQTLDVMGILISPELFGSSALSEVLTPLKSILTTETISYVGLIYTVFLAGLDMNFDTILRGRKKATSIAIAGVLIPMLCGGIIHALALKLYKGPPEYWANFGTPKAYMFWTLTLSVTGFPMVSHILADLKLLYTGLGRVTLTTAMISDFYNWVMFAMLVPFAINGGSAIYSVLSTIVYVLFCFILIRPYLVEIIVRKTNQNEWDNNGLFIVVMGAYASAAVTDLLGTHPVVGALVYGIMIPRGKFTHLLIEKSEDFGVVYLAPLFFGSCGIRLRIIYVIKTQGLGLVLFILFLSILPKILSTVIATQFYGMSVLDGVSIGLLMNTKGLLPILMLNSAWDKQILSVESFSILTIAVLVMTMVVPLVINAIYKPRKLYKQNKLKTLQNLKAEAELRILACVHNPRQATGMINILEAYHTTKLPPLRVFALQLVELTGHTASLFVSHVNQHNPQQSVGAQALTKAQEDLESITNIFQTYAAINESNNVETIAAASSYSTIHEDIYNVSQEKQANLILLPFHKQSNIEGILETANTAFQEINRNVMRDAPCTVGIFVDRGLASLFKVNLRVVMVYVGGPDDREALAVAWRMSKHQGVQLSVVRILLFGDAAEIDVMSHVENHGLLSVIVDSEKQKELDDEYMSAFRLKAVSNEDSIKYSEKEVRSRDDIPEVLNEIDQVGYDLYILGQGGGRNCLILSELMKWTDCPELGVVGDIVASNNFGSSSSLLIIQQYGFGGMVFENNNTTQQPKEAVGSNIEDPGPVFVKVQWHQ 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03205 876 PANTHER CATION/H + ANTIPORTER 18 838 - -
Viun1g03205 876 Gene3D - 42 487 IPR038770 -
Viun1g03205 876 Gene3D - 533 812 - -
Viun1g03205 876 Pfam Sodium/hydrogen exchanger family 115 478 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03205 Viun-Chr1 39970541 39973521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03205 18 838 Antiporter Super Family AT2G13620 34.495 1.15e-168 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03205 - - vun:114191181 1698.72