Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03179 ATGTTATCTACAACAATGCCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTCATGATGCAATTACTGTCCTCTCAAAATGCACTGTTGTGCCTCACCAAAATTCCACTCTAGGAGATCTCAAACTCTCTATCTCAGACCTTAACATGCTCCTCTCTCACTACATTCAAAAGGGCTGTCTCTTCACCACCCCATCTCTCCCCTCTCACGCTCTCATCCCTCACATCATCAACGCGCTTTCTCGCACGCTCTCCCTCTTCCCTCCCTTCGCTGGCCGTCTCAAAACTGACCATCATGGCTACGTCTACATCGCATGCAACGATGCTGGCGTCGATTTCATCCACGCCACCGCCGATCATATCTCCGTTACCGATCTTCTCTCACCTTCCGATGTTCATCCAACCGTCATGCACCTCTTCCCATTCCACCACAAAATTAGTTACACGGCGCATTCCTCCCCTATCATGGCCTTTCAGGTCACGGAGCTCGCTGACGGTGTTTTCATAGGTTGTGCTGTCTGTCACGCCGTCACCGACGGCGCCTCCTTCTGGAACTTCTTCAACACTTTCGCAGCAATTTCTCGAGGAGAAACCTCTTGCCTCTCTAGGCTCCCGGATTTTCGTCGGGATTCCATCCTCACCTCCAAGATTGTGCTTCGGCTGCCAAAAGAAATCAAGGTGACCTTCAACGTTGACGCACCCTTTCGCGAGAGAATTTTCAGCTTCAGCCGTGAGTCAATTCAGAAGCTGAAAGCCGCAGTGAATAATGGTGGGAAAATTTGTTGGTTGGAGAATGTTGAGAAGAACGTTGAGTTGATGGGGAAGCTGAGCCACGATACACAAGTGAAAACGACGGAGATTTCATCGTTTCAATCGTTGTGTGCGCTGATGTGGCGGTCCGTTACAAAGGCGAGGGATCTGGAAGAGACTAAAGTGACGACGTTTCGAATGGCAGTCAATGTTCGGAATCGCATGGAGCCCAAGTTGGGAGACCATTACTTTGGGAACGCGATTCAGAGCATTGCCACGTGTGCAGCGGCGGGTGACGTGGTGTCTAGCGAGCTTGGATGGTGCGCGGAGCAACTGAACAAAAGCGTGAAGGCATTCGACAGCGCTACAGTGTGCCGCAACGTGGAGAATTGGGAGCGTGAGCCGAAGTGCTTCGAGTTGGGGAACCACGACGGCGCCACTTTGCAGATGGGAAGCTCGCCCAGGTTTCCGATGTACGACAATGATTTCGGATGGGGGCGGCCACTCGCTGTGAGGAGCGGTGGAGCCAACAAGTTTGATGGAAAAATGTCGGCGTTTCCCGGTAGGAGTGGCGGTGGTAGCGTTGATTTGGAGGTGGTTTTGGCTCCTCACACCATGGACAAACTTCACTCTGATCCCGAGTTCATGTGTTATGTCTCCGGTTAG 1413 0.5166 MLSTTMPSSSSSSSSSSHDAITVLSKCTVVPHQNSTLGDLKLSISDLNMLLSHYIQKGCLFTTPSLPSHALIPHIINALSRTLSLFPPFAGRLKTDHHGYVYIACNDAGVDFIHATADHISVTDLLSPSDVHPTVMHLFPFHHKISYTAHSSPIMAFQVTELADGVFIGCAVCHAVTDGASFWNFFNTFAAISRGETSCLSRLPDFRRDSILTSKIVLRLPKEIKVTFNVDAPFRERIFSFSRESIQKLKAAVNNGGKICWLENVEKNVELMGKLSHDTQVKTTEISSFQSLCALMWRSVTKARDLEETKVTTFRMAVNVRNRMEPKLGDHYFGNAIQSIATCAAAGDVVSSELGWCAEQLNKSVKAFDSATVCRNVENWEREPKCFELGNHDGATLQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRSGGGSVDLEVVLAPHTMDKLHSDPEFMCYVSG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03179 470 Gene3D - 225 460 IPR023213 -
Viun1g03179 470 Gene3D - 21 224 IPR023213 -
Viun1g03179 470 Pfam Transferase family 21 465 - -
Viun1g03179 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 23 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03179 Viun-Chr1 39795329 39797270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03179 45 455 Monolignol Biosynthesis Gene Families AT5G48930 28.009 1.15e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03179 - - vum:124828482 748.043