Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03142 ATGGATACTTCTCTCCGTTTCTTCATACTTCTGTCTTTTGCTTTATTTCTTCAACTATGTCACTCATCATCGCCACTCAAGAGCTACATTGTCTACACTGGCAATTCCATGAAGGATGAGGATTCTGCGTTGGCTCTTTATTCAACCATACTACAAGAAGTTGCAGACAGCAATGGCGAGCCCAAGTCAGTGCAGCAGCACTACAAACGAAGTTTCGGTGGCTTTGTTGCTAAGCTAACGGAAGAGGAAGCCAATAGATTGGCTAGGCATGAAAAAGTGGTAGCTGTCTTTCCCAATCAAAAGAAGCAACTCCATACAACAAGGTCATGGGATTTTATTGGCTTCCCACTAAACGTACAAAGAGAAACAACTGAGAGTGATGTCATCATTGGAGTGCTTGACTCTGGAATCTGGCCAGAATCTAAGAGCTTCAATGACGAAGGATTCGGTCCACCACCTAGTAAATGGAAGGGCACCTGCCAAAGTTCTAAAAATTTCACGTGCAACAACAAAATCATTGGGGCTAAGATTTACAAAGCTGATGGATTCTTTTCCGATGATGACCCAAAGTCTCCATTAGACGTAGATGGTCATGGCACTCATACAGCATCAATAGCAGCAGGGAATCCAGTTAGTCAAGCAAGCATGTTAGGCCTTGCTCAGGGAACGGCAAGAGGTGGCGCCATAAAAGCGCGCATTGCTGTGTATAAAGTATGTTGGTTAGATGAAGGTTGTTCTGATGCAGACATTCTTGCTGCATTTGATGATGCAATTGCGGATGGGGTTGACATTATATCGGTTTCTCTTGGAGGTTTCAGTGATGAAAACTACTTCAGAGATGGAATTGGCATTGGAGCATTTCATGCTGTGAGAAAAGGAGTGTTGACAGTAACTTCAGCAGGGAACGGTGGTCCAAAATATGCCTCCCTTTCCAATTTTTTGCCCTGGTCAATTACTGTGGCTGCGAGTACCATAGACAGAAAGTTTGTTACCAAGGTTGGATTAGGTAACAACGTTACCTTTGAGGGTACCTCGATAAATACATTTGACCTGAAGGGAGAATTGTATCCTATAATCTATGGAGGAGATGCACCAAGCAAAGGCTTTGATTCATCGTCATCAAGGTTTTGCTTCAGCGGTTCGTTGGACAAAAAATTAGTGGAGGGTAAAATTGTTCTGTGTGATAGCAGAAGCAAAGCGACAGGCCCTTTCGATGCCGGTTCTGTTGGGGCATTGATACAAGGTCAAAGTTTTAGAGATCTTCCTCCTTCTCTTCCATTACCAGGATCGTACCTCGAATTGAAGGATGGTGTCACTGTACTTGCCTACATTAACTCCACAAGGACTCCAACTGCAACCGTATTTAAGACTGATGTGACAGAAGATACAATAGCCCCTGTTGTCGCCTCTTTCTCTTCAAGGGGTCCAAACCCTGTTACACCTGATGTTCTCAAGCCGGATTTAGTGGCTCCTGGAGTTTCAATTTTAGCTAGTTGGTCTCCAGTTTCCCCTCCTTCTGATGTCGAAGGCGACAATAGAACATTAAATTTCAACATCATCTCCGGAACTTCAATGGCTTGTCCACATGTTTCTGGGGCAGCCGCATATGTGAAGTCATTCCACCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACAACAGCTAAACAACTTAGACCCGAGATTAACCTTTACGCAGAATTCTCATATGGGGCAGGCCAAATTGATCCTTCCAAGGCTGTGTGCCCTGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGGTATAGTTCAAAGATTTTACAACTCATCACAGGAGATAACAGTAGCTGCTCTGAATCAAGTTCAGCAAGGGATCTAAACTATGCGTCGTTTGCACTATTTTCCCCACTCTCGAACTCCAATAAAGTAATAAGTGGGAGTTTTAACAGGACTGTTACAAATGTTGGGTCAGCAACGTCGACGTATAAAGCTAACGTGATTGGTCCTGAAGGACTGAAAATTGAAGCGAACCCGAGTGTTTTGTCATTCACTTCTCTTAACCAAAAGCTCTCATTTGTGCTCACCATTGAGGGAATAATAAAGGAACCTGTGGTATCAGGCTCTTTGACTTGGGATGATGGTAAATTCCAAGTGAGGAGCCCCATTGTTGTGTTTAACACAGCATAA 2196 0.4349 MDTSLRFFILLSFALFLQLCHSSSPLKSYIVYTGNSMKDEDSALALYSTILQEVADSNGEPKSVQQHYKRSFGGFVAKLTEEEANRLARHEKVVAVFPNQKKQLHTTRSWDFIGFPLNVQRETTESDVIIGVLDSGIWPESKSFNDEGFGPPPSKWKGTCQSSKNFTCNNKIIGAKIYKADGFFSDDDPKSPLDVDGHGTHTASIAAGNPVSQASMLGLAQGTARGGAIKARIAVYKVCWLDEGCSDADILAAFDDAIADGVDIISVSLGGFSDENYFRDGIGIGAFHAVRKGVLTVTSAGNGGPKYASLSNFLPWSITVAASTIDRKFVTKVGLGNNVTFEGTSINTFDLKGELYPIIYGGDAPSKGFDSSSSRFCFSGSLDKKLVEGKIVLCDSRSKATGPFDAGSVGALIQGQSFRDLPPSLPLPGSYLELKDGVTVLAYINSTRTPTATVFKTDVTEDTIAPVVASFSSRGPNPVTPDVLKPDLVAPGVSILASWSPVSPPSDVEGDNRTLNFNIISGTSMACPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKQLRPEINLYAEFSYGAGQIDPSKAVCPGLVYDAGEIDYVRFLCGQGYSSKILQLITGDNSSCSESSSARDLNYASFALFSPLSNSNKVISGSFNRTVTNVGSATSTYKANVIGPEGLKIEANPSVLSFTSLNQKLSFVLTIEGIIKEPVVSGSLTWDDGKFQVRSPIVVFNTA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03142 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Viun1g03142 731 Pfam Fibronectin type-III domain 628 727 IPR041469 -
Viun1g03142 731 CDD Peptidases_S8_3 102 557 IPR034197 -
Viun1g03142 731 Gene3D Peptidase S8/S53 domain 127 596 IPR036852 GO:0004252|GO:0006508
Viun1g03142 731 Gene3D - 326 461 - -
Viun1g03142 731 ProSiteProfiles Serine proteases, subtilase domain profile. 109 583 - -
Viun1g03142 731 SUPERFAMILY Subtilisin-like 104 586 IPR036852 GO:0004252|GO:0006508
Viun1g03142 731 FunFam Subtilisin-like protease SBT1.5 127 338 - -
Viun1g03142 731 CDD PA_subtilisin_like 333 454 - -
Viun1g03142 731 Pfam Peptidase inhibitor I9 28 105 IPR010259 -
Viun1g03142 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 105 IPR037045 -
Viun1g03142 731 Pfam Subtilase family 126 575 IPR000209 GO:0006508|GO:0008236
Viun1g03142 731 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Viun1g03142 731 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Viun1g03142 731 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Viun1g03142 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 727 IPR045051 -
Viun1g03142 731 Gene3D - 600 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03142 Viun-Chr1 39566290 39570399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03142 29 728 Subtilisin-like Serine Gene Family AT3G46850 49.374 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03142 - - gmx:100795826 1202.96