Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03118 ATGGGGAAGGGAACAGGGAGTTTCGGCAAGAGGAGGAACAAGACCCACACGCTCTGTGTGAGGTGTGGCCGTCGCAGCTTTCACCTTCAGAAGAGTCGGTGTGCTGCGTGTGCCTTCCCCGCTGCGCGCACCAGAAAGTACAACTGGAGCGTTAAGGCCATTAGGAGAAAGACTACCGGAACCGGAAGGATGAGGTACCTGCGTCACGTGCCTCGCAGATTCAAGAGCGGCTTTAGAGAGGGTACCGAGGCAGCACCAAGGAAGAGGGGGGCGGCTTCCACTACCTGA 288 0.5833 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAASTT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03118 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Viun1g03118 95 MobiDBLite consensus disorder prediction 72 95 - -
Viun1g03118 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Viun1g03118 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Viun1g03118 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Viun1g03118 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Viun1g03118 95 FunFam Ribosomal protein L37 1 88 - -
Viun1g03118 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03118 Viun-Chr1 39412290 39413151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03118 1 94 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 85.106 4.81e-56 166