Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03089 ATGGGTGATGCAATTGATTTGACCGGTGATGGAGGAGTCATTAAGACCATTTTGAGAAAAAGCAAAGCCGATGCTGTTGGCCCTACAGAAAATTTTCCTCTTGTTGATGTTCACTATGAAGGCACACTTGCTGATACCGGTGAAGTTTTTGACACAACACATGAAGATAACACTATATTCTCTTTTGAGATTGGGAAGGGCAGTGTTATCAAGGCTTGGGAGGTTGCAGTCAAAACCATGAAGGTCGGAGAAGTTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATTCCTCCAGAAGCAACACTTGTTTTTGAAGTTGAGTTAGTTGCCTGTCGGCCAAGGAAGGGCTCCAGTTTGGGAAGTGTTTCAGAGGAGAGAGCAAGGCTTGACGAGCTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGCCAAAGAGGAAGAGAAGAAGAAGAGAGAAGAAGCAAAGGCAGCTGCTGCTGCACGTGTGCAAGCAAAGTTAGAAGCCAAAAAAGGTCAAGGAAAGGGTAAAGGTAAAGCAAAGTAG 567 0.4515 MGDAIDLTGDGGVIKTILRKSKADAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFEIGKGSVIKAWEVAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPEATLVFEVELVACRPRKGSSLGSVSEERARLDELKKQRELAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03089 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Viun1g03089 188 MobiDBLite consensus disorder prediction 149 166 - -
Viun1g03089 188 SUPERFAMILY FKBP-like 8 124 - -
Viun1g03089 188 MobiDBLite consensus disorder prediction 149 188 - -
Viun1g03089 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Viun1g03089 188 Coils Coil 131 170 - -
Viun1g03089 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 181 - -
Viun1g03089 188 Gene3D - 2 120 IPR046357 GO:0003755
Viun1g03089 188 FunFam Peptidylprolyl isomerase 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03089 Viun-Chr1 39258609 39262167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03089 4 155 Calmodulin-binding Proteins AT5G48570 36.943 9.20e-14 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03089 1 39258609 39262167 Viun1g03089 1 39258609 39262167 ECH