Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03087 ATGGTTTTCACTTTGAGCAACAGAGTGCTATGCTTCATCATCATCATCATCACTTTTACCAGTTTCTTGCAACTTGCAGAGCCTTCAAACACGAGGGAAGACACGTTGCTCCAAGGCCACCCCCTTGCAGCAACCGATCGTTTAATTTCGCCTTCATCTTTATACACACTGCGTTTCTTTCAGCTTGATGATGGGTCTGAGGCTAACACCAAATTCTACCTTGGCATATCAGCCAAGAAGTACTATTACTATGTTTGGCTTGCCAACAGGGACAATCCAATCTACGATGACCCCGGGGTTCTCACCATTGATCAATATGGCAACCTCAAAATTGTGTCAAGTACTACCACTATGATGCTGTATTCAGTTGAAGCAGAAAGTAACAAAAGTGTTAGAGGGTCTTTGCTGGATACAGGAAACTTTGTGCTTTATGAATTCAACTTAGATGGATCCGTGAAGAGGGTGTTATGGCAGAGCTTTGATTACCCCACAGATACAATGTTGCCAGGGATGAAGCTTGGGTATGACAAGCACAGTGGCCACAAATGGTCTCTAACAGCAAGGAGAAGTTACAAAACTCTTTGGTCAGGGTCTTTCTCTCTCAGCCTTGACCCCAAAACTAACCAATTGGTTAGTATATGGAGAGGGGACATTATTTGGAGCAGTGGAGAGTGGAGAAACGGAAGTTTTAGCAACCTGAAAGCATCATCACTTGACAGAGAGAAGTTAAACTTCAGTTTCTTTTCAAATGAAAGTGTGACCTACTTTGAATTTTCTTCAGTTTCTGGTTATCTCATCATAGAACCATTGGGTAAAATGAATGCTAGTGGTGTCTCTTACTCATGTGTTGACGGTGAGATTGTGCCCGGTTGTACAACGGTACAGCCTCCGAAATGTAGGAAAGATAGTGATTTGTACTTTCCAAGTTGGAATAGTTTTGGAGCAATGTCAAGAAAGGGATACGTATTTGATGAAAGAGAGAACTTGACCATTTCTGATTGTTGGATGAGGTGTTTGAAAAATTGCTCCTGTGAGGCTTACACTTACGCATTCAAGGATGCAACGGGCTGTGAAATATGGAGCAGAGACACATCACACTTTGTTGAGACTAGTTCCGGTGTTGGCCGCCTAGTTTTCTTCTTTCTCAGCGAAACCAAAACCAAAGGCAAGAAGAGGAGAATATGGATTGCTGGTACTGCAGCTGGAGTTCTTTTCCTCATAGTCTCATTCATTGCATCCTTTATCATGTTCTGGAGAAAACAAAAAGAAACAGTTGAAAATCGCAAGAAGCGAACAAATGTATTCTCTGACATCGGAGAAAATACTGAAATTTCTGATGCGTGCGATGAAGGAAGAGAACAATGGAATGAGAAGAGGACACGCAGTGATACACATAAATTCGACTTTGTAACCATTCTCCAAGCAACGGACAATTTCTCTTTCGCGAATAAGATCGGAGAGGGTGGCTTTGGGCCTGTTTACAAGGGGAAATTGGCAAATGGCCAAAAAATAGCTATAAAGAGACTTTCAAAAAGCTCCGGACAAGGATTGGTAGAGTTCAGAAATGAAGCTATGTTGATTGTGAAACTGCAGCACACTAACCTTGTCAGGCTTCTAGGATTTTGCATTGACAGAGAAGAAAGAATATTAGTCTATGAATACATGGCCAACAAAAGTTTGAATTTATACCTTTTTGATGCCAACAAAAGAACTGTGTTAGATTGGAAGAGAAGGTACAAAATTATTGAAGGAATTGCTCAAGGACTTGTGTATTTGCATCAATATTCAAGATTAAAAGTGATATACAGATATTTGAAGGCTAGTAATATTTTATTGGATAATGAGTTAAACCCAAAAATATCTGATTTTGGAATGGCTCGGATACTTAAATGGACATTGTTAGAAGAAAAAACAAATAGAGTTGTTGGAACGTAA 1935 0.4021 MVFTLSNRVLCFIIIIITFTSFLQLAEPSNTREDTLLQGHPLAATDRLISPSSLYTLRFFQLDDGSEANTKFYLGISAKKYYYYVWLANRDNPIYDDPGVLTIDQYGNLKIVSSTTTMMLYSVEAESNKSVRGSLLDTGNFVLYEFNLDGSVKRVLWQSFDYPTDTMLPGMKLGYDKHSGHKWSLTARRSYKTLWSGSFSLSLDPKTNQLVSIWRGDIIWSSGEWRNGSFSNLKASSLDREKLNFSFFSNESVTYFEFSSVSGYLIIEPLGKMNASGVSYSCVDGEIVPGCTTVQPPKCRKDSDLYFPSWNSFGAMSRKGYVFDERENLTISDCWMRCLKNCSCEAYTYAFKDATGCEIWSRDTSHFVETSSGVGRLVFFFLSETKTKGKKRRIWIAGTAAGVLFLIVSFIASFIMFWRKQKETVENRKKRTNVFSDIGENTEISDACDEGREQWNEKRTRSDTHKFDFVTILQATDNFSFANKIGEGGFGPVYKGKLANGQKIAIKRLSKSSGQGLVEFRNEAMLIVKLQHTNLVRLLGFCIDREERILVYEYMANKSLNLYLFDANKRTVLDWKRRYKIIEGIAQGLVYLHQYSRLKVIYRYLKASNILLDNELNPKISDFGMARILKWTLLEEKTNRVVGT 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03087 644 Gene3D Transferase(Phosphotransferase) domain 1 555 644 - -
Viun1g03087 644 FunFam Os07g0541700 protein 555 644 - -
Viun1g03087 644 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 226 IPR036426 -
Viun1g03087 644 SMART blect_4 39 163 IPR001480 -
Viun1g03087 644 Pfam D-mannose binding lectin 84 189 IPR001480 -
Viun1g03087 644 CDD B_lectin 48 163 IPR001480 -
Viun1g03087 644 ProSiteProfiles PAN/Apple domain profile. 299 383 IPR003609 -
Viun1g03087 644 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 125 644 - -
Viun1g03087 644 SMART ntp_6 308 384 IPR003609 -
Viun1g03087 644 Pfam Protein kinase domain 481 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03087 644 Pfam PAN-like domain 327 363 IPR003609 -
Viun1g03087 644 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 444 554 - -
Viun1g03087 644 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Viun1g03087 644 ProSiteProfiles Protein kinase domain profile. 479 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03087 644 Gene3D - 29 160 IPR036426 -
Viun1g03087 644 SUPERFAMILY Protein kinase-like (PK-like) 457 644 IPR011009 -
Viun1g03087 644 Gene3D Phosphorylase Kinase; domain 1 442 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03087 Viun-Chr1 39181986 39185687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03087 387 644 Receptor kinase-like Gene Family AT4G23190 49.612 1.20e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun1g03087 Pkinase 5.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03087 - - var:108327601 1058.13