Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03085 ATGGTTTTCACTTTGAGCAACAGAGTGCTATGCTTCATCATCATCATCATCACTTTTACCAGTTTCTTGCAACTTGCAGAGCCTTCAAACACGAGGGAAGACACGTTGCTCCAAGGCCACCCCCTTGCAGCAACCGATCGTTTAATTTCGCCTTCATCTTTATACACACTGCGTTTCTTTCAGCTTGATGATGGGTCTGAGGCTAACACCAAATTCTACCTTGGCATATCAGCCAAGAAGTACTATTACTATGTTTGGCTTGCCAACAGGGACAATCCAATCTACGATGACCCCGGGGTTCTCACCATTGATCAATATGGCAACCTCAAAATTGTGTCAAGTACTACCACTATGATGCTGTATTCAGTTGAAGCAGAAAGTAACAAAAGTGTTAGAGGGTCTTTGCTGGATACAGGAAACTTTGTGCTTTATGAATTCAACTTAGATGGATCCGTGAAGAGGGTGTTATGGCAGAGCTTTGATTACCCCACAGATACAATGTTGCCAGGGATGAAGCTTGGGTATGACAAGCACAGTGGCCACAAATGGTCTCTAACAGCAAGGAGAAGTTACAAAACTCTTTGGTCAGGGTCTTTCTCTCTCAGCCTTGACCCCAAAACTAACCAATTGGTTAGTATATGGAGAGGGGACATTATTTGGAGCAGTGGAGAGTGGAGAAACGGAAGTTTTAGCAACCTGAAAGCATCATCACTTGACAGAGAGAAGTTAAACTTCAGTTTCTTTTCAAATGAAAGTGTGACCTACTTTGAATTTTCTTCAGTTTCTGGTTATCTCATCATAGAACCATTGGGTAAAATGAATGCTAGTGGTGTCTCTTACTCATGTGTTGACGGTGAGATTGTGCCCGGTTGTACAACGGTACAGCCTCCGAAATGTAGGAAAGATAGTGATTTGTACTTTCCAAGTTGGAATAGTTTTGGAGCAATGTCAAGAAAGGGATACGTATTTGATGAAAGAGAGAACTTGACCATTTCTGATTGTTGGATGAGGTGTTTGAAAAATTGCTCCTGTGAGGCTTACACTTACGCATTCAAGGATGCAACGGGCTGTGAAATATGGAGCAGAGACACATCACACTTTGTTGAGACTAGTTCCGGTGTTGGCCGCCTAGTTTTCTTCTTTCTCAGCGAAACCAAAACCAAAGGCAAGAAGAGGAGAATATGGATTGCTGGTACTGCAGCTGGAGTTCTTTTCCTCATAGTCTCATTCATTGCATCCTTTATCATGTTCTGGAGAAAACAAAAAGAAACAGTTGAAAATCGCAAGAAGCGAACAAATGTATTCTCTGACATCGGAGAAAATACTGAAATTTCTGATGCGTGCGATGAAGGAAGAGAACAATGGAATGAGAAGAGGACACGCAGTGATACACATAAATTCGACTTTGTAACCATTCTCCAAGCAACGGACAATTTCTCTTTCGCGAATAAGATCGGAGAGGGTGGCTTTGGGCCTGTTTACAAGGGGAAATTGGCAAATGGCCAAAAAATAGCTATAAAGAGACTTTCAAAAAGCTCCGGACAAGGATTGGTAGAGTTCAGAAATGAAGCTATGTTGATTGTGAAACTGCAGCACACTAACCTTGTCAGGCTTCTAGGATTTTGCATTGACAGAGAAGAAAGAATATTAGTCTATGAATACATGGCCAACAAAAGTTTGAATTTATACCTTTTTGATGCCAACAAAAGAACTGTGTTAGATTGGAAGAGAAGGTACAAAATTATTGAAGGAATTGCTCAAGGACTTGTGTATTTGCATCAATATTCAAGATTAAAAGTGATATACAGATATTTGAAGGCTAGTAATATTTTATTGGATAATGAGTTAAACCCAAAAATATCTGATTTTGGAATGGCTCGGATACTTAAATGGACATTGTTAGAAGAAAAAACAAATAGAGTTGTTGGAACGTATGGTTATATGTCTCCAGAATATGCAATGAGTGGAGTTATCTCAACCAAAATTGACGTATACAGCTTTGGGGTATTACTCTTAGAGATTGTGACCGGAAAGAAAAATATTAGTGACGATTTTTCATTGAACCTAATAGGATATGCATGGCAATTATGGAATGAAGGGAAAGCTCTAAAGCTAATTGACACAATTGTGAATGGTTCAAGCAACCACATCCAAGTTATGCGATGCATTCATATAGGTCTGTTGTGCACTCAAGACAAAGCAAAGGATAGACCCACTATGCTTGAGGTTATTTCTTTTCTTTCAAATGAAAATGCTGAGTTACCTTCTCCTATACAACCACCACTTTATACCATCAAAGGTGCGAAGGAGGCAGAGCAACATAAATATTGCTCCAATAATGACATCACAATGTCAATCACATCTGGAAGATAA 2373 0.397 MVFTLSNRVLCFIIIIITFTSFLQLAEPSNTREDTLLQGHPLAATDRLISPSSLYTLRFFQLDDGSEANTKFYLGISAKKYYYYVWLANRDNPIYDDPGVLTIDQYGNLKIVSSTTTMMLYSVEAESNKSVRGSLLDTGNFVLYEFNLDGSVKRVLWQSFDYPTDTMLPGMKLGYDKHSGHKWSLTARRSYKTLWSGSFSLSLDPKTNQLVSIWRGDIIWSSGEWRNGSFSNLKASSLDREKLNFSFFSNESVTYFEFSSVSGYLIIEPLGKMNASGVSYSCVDGEIVPGCTTVQPPKCRKDSDLYFPSWNSFGAMSRKGYVFDERENLTISDCWMRCLKNCSCEAYTYAFKDATGCEIWSRDTSHFVETSSGVGRLVFFFLSETKTKGKKRRIWIAGTAAGVLFLIVSFIASFIMFWRKQKETVENRKKRTNVFSDIGENTEISDACDEGREQWNEKRTRSDTHKFDFVTILQATDNFSFANKIGEGGFGPVYKGKLANGQKIAIKRLSKSSGQGLVEFRNEAMLIVKLQHTNLVRLLGFCIDREERILVYEYMANKSLNLYLFDANKRTVLDWKRRYKIIEGIAQGLVYLHQYSRLKVIYRYLKASNILLDNELNPKISDFGMARILKWTLLEEKTNRVVGTYGYMSPEYAMSGVISTKIDVYSFGVLLLEIVTGKKNISDDFSLNLIGYAWQLWNEGKALKLIDTIVNGSSNHIQVMRCIHIGLLCTQDKAKDRPTMLEVISFLSNENAELPSPIQPPLYTIKGAKEAEQHKYCSNNDITMSITSGR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03085 790 SMART blect_4 39 163 IPR001480 -
Viun1g03085 790 ProSiteProfiles PAN/Apple domain profile. 299 383 IPR003609 -
Viun1g03085 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 444 554 - -
Viun1g03085 790 Pfam PAN-like domain 327 363 IPR003609 -
Viun1g03085 790 ProSiteProfiles Protein kinase domain profile. 479 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03085 790 SUPERFAMILY Protein kinase-like (PK-like) 463 765 IPR011009 -
Viun1g03085 790 Gene3D Transferase(Phosphotransferase) domain 1 555 756 - -
Viun1g03085 790 Pfam D-mannose binding lectin 84 189 IPR001480 -
Viun1g03085 790 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Viun1g03085 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 555 755 - -
Viun1g03085 790 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 127 763 - -
Viun1g03085 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 226 IPR036426 -
Viun1g03085 790 CDD B_lectin 48 163 IPR001480 -
Viun1g03085 790 SMART ntp_6 308 384 IPR003609 -
Viun1g03085 790 PIRSF SRK 273 790 IPR024171 GO:0004674
Viun1g03085 790 PIRSF SRK 5 276 IPR024171 GO:0004674
Viun1g03085 790 Gene3D - 29 160 IPR036426 -
Viun1g03085 790 CDD STKc_IRAK 485 747 - -
Viun1g03085 790 Pfam Protein kinase domain 481 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g03085 790 Gene3D Phosphorylase Kinase; domain 1 442 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03085 Viun-Chr1 39181986 39186316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03085 452 778 Receptor kinase-like Gene Family AT4G11480 53.172 4.17e-115 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun1g03085 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03085 - - gmx:100782230 1269.6