Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03022 ATGAAACAACACTTTGATCTTGAAGTGGTGGCCTCAGCAGAATATGAATCTGAAGTTAGAAGCCAGGTTCAAGAAACCTATGCAGGTCCTTGCAGTGACAACCTCACCAACTCTCCCCATAAACCAATAGAATTTCATCTCCATTCAGATGCTATCTCCCTTGACTTAACTCTCAACTTCAACAACAGTGACTTGGTGGTTACAGATTCAACAGGACTCTCATTCTCAAGCACTACCAGCGAGAGCAACAACAACGATCCTCCCTCTCAAACCATGCCACGGGTCTTCTCTTGCAATTACTGTAACCGCAAGTTTTTGAGTTCTCAGGCTCTTGGAGGCCACCAAAATGCACACAAGAGAGAAAGAACATTAGCAAAGAGAGCCTTACGCATGGGGTTTTTCTCTGAGAGGTATGCCAGTCTTGCATCTCTCCCTCTTCATGGTTCTTTCAGGTCCTTGGGGATAAAGGCACACTCTTCACTGCACCACGGCTTTTCACCAACAATGAGGCCTTCTGAGATGAAAAGCAGTGCAAGATTTGAGCAAGGATATGTTGGTTTTCCAATATTCTTGGAGGAGGATGAAGCAGAACTCTTGTGGCAAGGTAGTTACCATCAGGTTCCCTCTAATGGAGGCCATACTCATCAGAATTTCACACTGAGTGGAACCTCTAATTTGAGTTTTACTGGGGTGAATCATCCACCGGTTGACATAGAGAACTCAACACCTGAGTTGACATTGAAACTTTAA 750 0.4453 MKQHFDLEVVASAEYESEVRSQVQETYAGPCSDNLTNSPHKPIEFHLHSDAISLDLTLNFNNSDLVVTDSTGLSFSSTTSESNNNDPPSQTMPRVFSCNYCNRKFLSSQALGGHQNAHKRERTLAKRALRMGFFSERYASLASLPLHGSFRSLGIKAHSSLHHGFSPTMRPSEMKSSARFEQGYVGFPIFLEEDEAELLWQGSYHQVPSNGGHTHQNFTLSGTSNLSFTGVNHPPVDIENSTPELTLKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03022 249 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Viun1g03022 249 Gene3D Classic Zinc Finger 75 139 - -
Viun1g03022 249 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 49 182 IPR044246 GO:0009788
Viun1g03022 249 SUPERFAMILY beta-beta-alpha zinc fingers 94 123 IPR036236 -
Viun1g03022 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Viun1g03022 249 FunFam Zinc finger protein 2 73 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03022 Viun-Chr1 38748255 38751140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03022 94 249 C2H2 Transcription Factor Family AT1G66140 50.276 4.58e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03022 - - gmx:100815175 391.734