Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03003 ATGGCAACTGAACCAGCTTTAACATTCTCTTTGGCTTCTGTGGTTCAAGAGGTTCTTCAACAGCATGCTAGTCGTTTGGACGCAAACTCGGCATCGAGAAAAACTGAAGAAACCTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTACGGAAAACAGTTGGAGTTGTTCGAGGGAAAGACTTGCCAGCTGAGCCTTCCGAAGGAGACTTCAGGATTGGATTGCGTAGTGGGATTATCCTATGTAGTGTTCTTAACAAAATTCAACCTGGAACAGTGAAGGTACTTGAAAAACCTAGCGATTCTGTTATTGTTCCTGATGGAGGAACATCTACATACCAGTACCAAGAAAATATAAAGAATTTTCTTGTGGCTATGGAGGACATGGGGCTTCCTACCTTCGGAGTTTCTGATTTGGAACAGGGAGGAAACTCTGAGAGGGTAGTGAATTGCGTTCTAGAGCTAAAGTCTTATGCCGAACGAAAAGTTGGAGGAGGAAGTGGTTCTGGGAAATATAGTGGGGTTGCGAATGCAAAGCCACCTATGTCTGGGAAACCAATTACGAGGAAAAACTCAGAACCATTCATGAAGTGTATGATTACTGTGCCATCAGGGGATAGAGATGGTGGTTATATGAGTGATCCCGGGCAAGATCGAAGCGAAAGGGCTTCTTTTTCCTTAAATTCAATGGTGCGTCAATATTTGTCCGACAAAAATCCAGAAGAAATTCTCTCTGCAGTGGAATCCTTGCTTAGCAAAGTCATGGAGGAATGTGAACATCACATGCAAATCCGATGTAAAATGTATAAAACAACTGGGGAAGATAAAGCACCCTCTGAAACTGTATGTTCAATTTTAGAAGCTGCTTCTATTAATGAAATGGTGAAAGAAACGGAAGATGAACCCGCTGTAGAAGAAGAGCATGATGATCTACAAGATAAAAATGATGTAAAAGATGAACAAGATGTACGAGATGAACAGAATGTAAAAGTTGAGCGTGACATTCAAGATGAACACAAGGAACAAAATAAACGAGAGGAAATTTATGAAAAGATGTGCAATGAACACGAAAAAAGAGAACATGAAAAATCAATCCACAAAATTTCGATTTCGAAGCAGCAAAATATAGTTGCGCGACAAAATAGAAGCATCCAGGAATTGAAAAACATTGTCCATCAAACAAAACTAGGAATGCAATTGATGCAAAGTGAACACCAGAAGGAGATCATTAATCTAAGCAAGCACCTATACAGCCTAACCTGTGCTGCTTCGGGATACCATAAAGTTCTTGAAGAAAACCGCAAGTTGTATAATGTTGTGCAAGACCTGAAAGGAAATATTAGGGTATACTGTAGAGTCCGACCATTCTTGGGTGGTCAACCAAGCCATTATAGCTCTGTCGGTAACGTGGAAGATGGAAGTATCTCAATCATAACACCTTCCAAATACGGTAAAGAGGGGAAGAAGACATTTAATTTCAATAGAGCATTTGGTCCTTCAGCAACCCAAGGAGAAGTTTTTGCCGACACACAACCTCTTATTCGTTCTGTTTTGGACGGTTATAATGTCTGCATATTTGCCTATGGCCAGACGGGATCAGGAAAAACATTCACTATGTCTGGGCCAGATGAACTTAACGATGAGACCATAGGTGTCAACTATCGTGCACTAGGAGACCTTTTCTATCTCTCCGACCAAAGAAAAGATACAATTTCTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAACGAGCAAGTTAGGGACCTACTTACGCCCGATGCCGCTAATAAAAGGTTAGACATCCGCAATAGTTCCCTTAATGGCATCAACGTTCCAGATGCTAACCTTGTTCGGGTTTCATGCACTTCTGATGTCATAAGTTTGATGAACTTGGGACATAAGAATCGTGCTGTTGGTTCTACTGCCATGAATGATCGTAGTAGTCGCTCTCACAGTTGTCTTACAGTTCATGTTCAAGGAAAGAACTTGACATCAGGAGGCACAGTTCGTGGTTCCATGCATCTGGTTGATCTGGCAGGAAGTGAAAGGGCTGATAAAACTGAGGCTACAGGGGATAGACTCAAGGAGGCTCAACATATCAACAAGTCACTTTCTGCACTGGGAGATGTAATTTCTGCACTTGCTCAAAAGAGTCCACATGTTCCCTACAGGAACAGCAAACTTACTCAGCTACTTCAAGATTCTCTTGGAGGGCAAGCAAAGACTCTCATGTTTGTTCATATAAGTCCGGAGGCTGAAGCTCTTGGAGAAACACTTAGCACACTCAAGTTCGCTGAACGAGTCTCCACTGTCGAACTCGGTGCAGCGAGAGTTAATAAAGACAGTTCAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTTTGAAGGCAGCCTTAGCGAGAAAGGAAGGAGAAGCAGAACAGTTTAATAATGGTGGCAATGAAACACCTAAGCATAAATCATATGCATCTTCTCCTCCTGTGACAAGGCCTTCGAGTGGTGGATCTCGTAAGCTATCAAAGGATGATTCTAGTAGCCTGGATGATCAGAAACATGTTGCATCAACGTTGAAAAGTCAAAGCATAGATCTCCATGACATGGGTGCCAATTCACCTCAATGGCAACCTGTTACAAGTGAAAGAAAGGAGGAAGATAAAGAATCAATTTCTGGAGATTGGGGTGATAACAAGATTTCCATGAACAGAAACGACAGCATAACTAGTGATGATAGTGTTGTGGGAGCGTGGGAAGTAGAAAGCAAACAATCTTCTCCGAGGTTAAGTCCCACTTTTCTCTCAGAGCCTTCTAAAATATCCCTAGACAACTCCTCTCATAAAAAGGACAACCAAGACAATGAAGAATTACAGAGACCCAGTTTTGATATGACTACCACAGATGAATCAGATGAACACGAGATTGCTACTGTAACTAGTGATTCTTCTGAGTCAGACTTGCATTGGCCACCACAAATACCTAAACCAATCACCATTTCCAGTGGATTAGGCATTAAAGCGAAGAAAAAAACTAATCTCAGATCAATAAAGAACTCAGACAGCAGGAGTATGATCCCATCATTCATTCCTGCGCCCGTGCCTGTGAATGTGCCTGTGCCTGTTCCCGTTTCATCAAGGAAACAACAACCCAGCCCAGTTACTCAAGGAAGAAAGCTCCCAGGATCTTCTGATGTAAGGAGAAGGTTTGGGAACAGTGCCAAGTGA 3219 0.4206 MATEPALTFSLASVVQEVLQQHASRLDANSASRKTEETSLRRYEAAGWLRKTVGVVRGKDLPAEPSEGDFRIGLRSGIILCSVLNKIQPGTVKVLEKPSDSVIVPDGGTSTYQYQENIKNFLVAMEDMGLPTFGVSDLEQGGNSERVVNCVLELKSYAERKVGGGSGSGKYSGVANAKPPMSGKPITRKNSEPFMKCMITVPSGDRDGGYMSDPGQDRSERASFSLNSMVRQYLSDKNPEEILSAVESLLSKVMEECEHHMQIRCKMYKTTGEDKAPSETVCSILEAASINEMVKETEDEPAVEEEHDDLQDKNDVKDEQDVRDEQNVKVERDIQDEHKEQNKREEIYEKMCNEHEKREHEKSIHKISISKQQNIVARQNRSIQELKNIVHQTKLGMQLMQSEHQKEIINLSKHLYSLTCAASGYHKVLEENRKLYNVVQDLKGNIRVYCRVRPFLGGQPSHYSSVGNVEDGSISIITPSKYGKEGKKTFNFNRAFGPSATQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDELNDETIGVNYRALGDLFYLSDQRKDTISYEISVQMLEIYNEQVRDLLTPDAANKRLDIRNSSLNGINVPDANLVRVSCTSDVISLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGKNLTSGGTVRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISALAQKSPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEAEALGETLSTLKFAERVSTVELGAARVNKDSSDVKELKEQIASLKAALARKEGEAEQFNNGGNETPKHKSYASSPPVTRPSSGGSRKLSKDDSSSLDDQKHVASTLKSQSIDLHDMGANSPQWQPVTSERKEEDKESISGDWGDNKISMNRNDSITSDDSVVGAWEVESKQSSPRLSPTFLSEPSKISLDNSSHKKDNQDNEELQRPSFDMTTTDESDEHEIATVTSDSSESDLHWPPQIPKPITISSGLGIKAKKKTNLRSIKNSDSRSMIPSFIPAPVPVNVPVPVPVSSRKQQPSPVTQGRKLPGSSDVRRRFGNSAK 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03003 1072 MobiDBLite consensus disorder prediction 940 955 - -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 809 840 - -
Viun1g03003 1072 CDD CH_AtKIN14-like 41 156 - -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 894 910 - -
Viun1g03003 1072 PRINTS Kinesin heavy chain signature 519 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 PRINTS Kinesin heavy chain signature 721 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 PRINTS Kinesin heavy chain signature 641 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 PRINTS Kinesin heavy chain signature 672 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 ProSiteProfiles Kinesin motor domain profile. 445 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 SUPERFAMILY Calponin-homology domain, CH-domain 42 169 IPR036872 -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 307 325 - -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 1040 1056 - -
Viun1g03003 1072 Coils Coil 778 805 - -
Viun1g03003 1072 SMART kinesin_4 443 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 MobiDBLite consensus disorder prediction 917 939 - -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 296 325 - -
Viun1g03003 1072 FunFam Kinesin-like protein KIN-14I isoform A 440 812 - -
Viun1g03003 1072 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 945 IPR027640 GO:0003777|GO:0007018
Viun1g03003 1072 Pfam Calponin homology (CH) domain 42 159 IPR001715 GO:0005515
Viun1g03003 1072 ProSiteProfiles Calponin homology (CH) domain profile. 39 159 IPR001715 GO:0005515
Viun1g03003 1072 CDD KISc_C_terminal 443 773 - -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 878 892 - -
Viun1g03003 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 805 IPR027417 -
Viun1g03003 1072 SMART ch_5 41 157 IPR001715 GO:0005515
Viun1g03003 1072 MobiDBLite consensus disorder prediction 850 877 - -
Viun1g03003 1072 Pfam Kinesin motor domain 451 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g03003 1072 Gene3D - 31 162 IPR036872 -
Viun1g03003 1072 Gene3D Kinesin motor domain 440 812 IPR036961 -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 168 189 - -
Viun1g03003 1072 ProSitePatterns Kinesin motor domain signature. 671 682 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun1g03003 1072 MobiDBLite consensus disorder prediction 803 1072 - -
Viun1g03003 1072 MobiDBLite consensus disorder prediction 963 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03003 Viun-Chr1 38582162 38588347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03003 433 807 Calmodulin-binding Proteins AT5G65930 40.691 1.51e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03003 K10406 - gmx:100799535 1503.8