Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02998 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCCATGAGGTGGCACCCGGACAAGTGGACTCGGAATCCCGCAACCGCCGGAGAAGCCAAGCGGCGGTTTCAGCAAATCCAAGAAGCTTACTCAGTTCTTTCCGATCAGTCTAAAAGATCAATGTACGATGCGGGGCTCTACGACCCTTTGGAGGAAGAAGACCAAGAGTTTTGTGATTTCATGCAAGAGATGATATCGATGATGAACAATGTGAAAGACGAGGGGGACAGTATGGAGGACCTACAGAGGATGTTCGTGGAGATGGTGGGGGGTGATGGGATCGGCATTGACTTGAACCAGGATCAGATGGCTGGGAAGCGAGGACGAGTCAACGGATCAAGAGGCAATGCGGCCAAGCGCAGCAACTCTCGATCCTAG 483 0.5321 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWTRNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQEFCDFMQEMISMMNNVKDEGDSMEDLQRMFVEMVGGDGIGIDLNQDQMAGKRGRVNGSRGNAAKRSNSRS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02998 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Viun1g02998 160 SMART dnaj_3 11 73 IPR001623 -
Viun1g02998 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Viun1g02998 160 PANTHER PUTATIVE, EXPRESSED-RELATED 7 129 - -
Viun1g02998 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Viun1g02998 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Viun1g02998 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
Viun1g02998 160 Gene3D DnaJ domain 2 104 IPR036869 -
Viun1g02998 160 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Viun1g02998 160 MobiDBLite consensus disorder prediction 135 160 - -
Viun1g02998 160 CDD DnaJ 12 70 IPR001623 -
Viun1g02998 160 Pfam DnaJ domain 13 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02998 Viun-Chr1 38551011 38552293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02998 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 3.84e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02998 - - gmx:548049 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02998 1 38551011 38552293 Viun1g02998 1 38551011 38552293 ECH