LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g02996	ATGGAACCAAAAAGACAAACCCAGCAAGAGGAGGAAAAAAGGGGTGATCAAGAGCGGAGTCGTGAGAATTCACGAGTATCTGAAACATGGCGCATCGTTAGAAGTTTTAGGTATCTGCGTCTCAATTTGAATGAACTGCAGCCCTACTTGGTAGATTCAGTTCGAAATATGATACGACAGGAGTTGGAACTCCAACTAGCAACAAGACCAAATAGTATTCAGACTGAAATATCTGGAGCCCGCAGATTGTTGAAGCTGGTTTTTAGGAATAAATTACCTGATACAATTTATACCCTCTCCAAATTGAAAGATAGAGACAACAATCCTCTTGAGGTGTTTCTTCTCGATATTGAATCTAATTCTATAGTCTGTGATGAGAATGATCCACTGTCTTCGATCAAGGTTAAGATTTGCGTTCTTGATGGTGAGTTTGGCTCAGATGGCGATGAAAATTGGAGCAAAGATGAATTCAACTCCAAAATCTTACGTCAAAGAGCGAATAAAGGGCAGTTACTGAAAGGAGATACGGTTATTGCGCTTAAAAATGGAATAGGTTTTATCCCAACTGGATTATCATTCACTGACAACTCATGTTGGATAAGAACACGACGTTTCATATTAGGAGCGAAGGTTGCGAAATCAAATTTGAATGACGCAATAATCATCAGGGAAGGTATAAGTAAACCTTTTACAGTCAAGGACTACAGAGTGAACAAGGGAAAGGATCCAACCCTCAGTGATGAAATATGGCATTTGAAACATATATCAAAAAAGGGGAAAATTTATGAGGAGCTTGCTAAGGACGGGATACTCACTGTTGGGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTGGAACAGAAACTTGGCAAGATTTCCAAAAGGAAACGGGAAGAAATTTTTAAGCAGGCTAAGAAAGCAAAGCATGCTGAAACTGGTGTTGCTGAAACCGTAATATTTGACAGACCAAACTATCTATCAGAGAATAATACTCTCAACTCCGATCAGAGGCAAGCATGTCAAAGTTCGAGGGGTCTGATGCAGATTGAGGTGATAAATGAAGAAAGTCCTTGTCTAAGGGATCCAGAAGACTGGTCAGCATTTTGTGATGAATTATTTACAGAATGA	1134	0.3959	MEPKRQTQQEEEKRGDQERSRENSRVSETWRIVRSFRYLRLNLNELQPYLVDSVRNMIRQELELQLATRPNSIQTEISGARRLLKLVFRNKLPDTIYTLSKLKDRDNNPLEVFLLDIESNSIVCDENDPLSSIKVKICVLDGEFGSDGDENWSKDEFNSKILRQRANKGQLLKGDTVIALKNGIGFIPTGLSFTDNSCWIRTRRFILGAKVAKSNLNDAIIIREGISKPFTVKDYRVNKGKDPTLSDEIWHLKHISKKGKIYEELAKDGILTVGDLLKEHETNPSSLEQKLGKISKRKREEIFKQAKKAKHAETGVAETVIFDRPNYLSENNTLNSDQRQACQSSRGLMQIEVINEESPCLRDPEDWSAFCDELFTE	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g02996	377	PANTHER	OS02G0177800 PROTEIN	19	311	IPR012416	GO:0005516
	Viun1g02996	377	MobiDBLite	consensus disorder prediction	1	22	-	-
	Viun1g02996	377	Pfam	Calmodulin binding protein-like N-terminal domain	84	234	IPR046831	-
	Viun1g02996	377	Pfam	Calmodulin binding protein central domain	245	308	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g02996	Viun-Chr1	38541711	38545935	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun1g02996	82	307	Calmodulin-binding Proteins	AT2G24300	36.957	1.92e-39	146

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g02996	-		-	vra:106757518	505.753