LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g02994	ATGATACGACAGGAGTTGGAACTCCAACTAGCAACAAGACCAAATAGTATTCAGACTGAAATATCTGGAGCCCGCAGATTGTTGAAGCTGGTTTTTAGGAATAAATTACCTGATACAATTTATACCCTCTCCAAATTGAAAGATAGAGACAACAATCCTCTTGAGGTGTTTCTTCTCGATATTGAATCTAATTCTATAGTCTGTGATGAGAATGATCCACTGTCTTCGATCAAGGTTAAGATTTGCGTTCTTGATGGTGAGTTTGGCTCAGATGGCGATGAAAATTGGAGCAAAGATGAATTCAACTCCAAAATCTTACGTCAAAGAGCGAATAAAGGGCAGTTACTGAAAGGAGATACGGTTATTGCGCTTAAAAATGGAATAGGTTTTATCCCAACTGGATTATCATTCACTGACAACTCATGTTGGATAAGAACACGACGTTTCATATTAGGAGCGAAGGTTGCGAAATCAAATTTGAATGACGCAATAATCATCAGGGAAGGTATAAGTAAACCTTTTACAGTCAAGGACTACAGAGGTGAGTTGAACAAGGGAAAGGATCCAACCCTCAGTGATGAAATATGGCATTTGAAACATATATCAAAAAAGGGGAAAATTTATGAGGAGCTTGCTAAGGACGGGATACTCACTGTTGGGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTGGAACAGAAACTTGGCAAGATTTCCAAAAGGAAACGGGAAGAAATTTTTAAGCAGGCTAAGAAAGCAAAGCATGCTGAAACTGGTGTTGCTGAAACCGTAATATTTGACAGACCAAACTATCTATCAGAGAATAATACTCTCAACTCCGATCAGAGGCAAGCATGTCAAAGTTCGAGGGGTCTGATGCAGATTGAGGTGATAAATGAAGAAAGTCCTTGTCTAAGGGATCCAGAAGACTGGTCAGCATTTTGTGATGAATTATTTACAGAATGA	972	0.3899	MIRQELELQLATRPNSIQTEISGARRLLKLVFRNKLPDTIYTLSKLKDRDNNPLEVFLLDIESNSIVCDENDPLSSIKVKICVLDGEFGSDGDENWSKDEFNSKILRQRANKGQLLKGDTVIALKNGIGFIPTGLSFTDNSCWIRTRRFILGAKVAKSNLNDAIIIREGISKPFTVKDYRGELNKGKDPTLSDEIWHLKHISKKGKIYEELAKDGILTVGDLLKEHETNPSSLEQKLGKISKRKREEIFKQAKKAKHAETGVAETVIFDRPNYLSENNTLNSDQRQACQSSRGLMQIEVINEESPCLRDPEDWSAFCDELFTE	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g02994	323	Pfam	Calmodulin binding protein-like N-terminal domain	28	178	IPR046831	-
	Viun1g02994	323	PANTHER	OS02G0177800 PROTEIN	5	257	IPR012416	GO:0005516
	Viun1g02994	323	Pfam	Calmodulin binding protein central domain	191	254	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g02994	Viun-Chr1	38541024	38545935	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun1g02994	26	253	Calmodulin-binding Proteins	AT2G24300	38.261	1.96e-42	153

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g02994	-		-	vra:106757518	465.692