Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02992 ATGGCGACAAAAAGAACCTACGACGAGGAGGACCATCACAGTAATGATGACATCAATATTCAAACGGTTGTTAAAAGGAGACGCGCCGAGACCATCGACCATTCGCTTCTTGCCGTGTTGAAACCTGTTCTTCGCGAACTGCTAGAGGAGGTGATTCCACCTATGCTACAGCGTTACTGGTCACCGTGTTGCCGAAAATGCCATAACCATGAGGGTGGCAGTTCTGGAGGCAGAGATTTCCAATTGTGCTTCGTCAATGGATTGCCTCGACAAATTTTCACCATGGCCAATCTCACAGCTGAGGACGGTGGTTCACTTCAAATTGAGCTACGGGATGCTGCATCGCAGCAACGCGTTGACAGAGTGGAATTTTCCAGCATGAAGGCTCAGATCTATGTGCTGGATGGGGATTTTGAAAGCCAGGACTGGACTGCAGAGGAATTTGATGGCAACATTGTGAAACCAAGAGAGGGAAGGGACCATTACTCAGAGGACAAACATTTATTAAAATTGAAAAAGGGGTTGGTTTTATCGATAAGAAGAGGCTTAAGATTACTGATAATTCTTGCACCACAAGAACCAAAACGTTTCGGTTGGGAGTTAAAATCAGGGGATCTAACTCCCTTGAAGCAGGGATCAGGGAAGCCATAA 651 0.4624 MATKRTYDEEDHHSNDDINIQTVVKRRRAETIDHSLLAVLKPVLRELLEEVIPPMLQRYWSPCCRKCHNHEGGSSGGRDFQLCFVNGLPRQIFTMANLTAEDGGSLQIELRDAASQQRVDRVEFSSMKAQIYVLDGDFESQDWTAEEFDGNIVKPREGRDHYSEDKHLLKLKKGLVLSIRRGLRLLIILAPQEPKRFGWELKSGDLTPLKQGSGKP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02992 216 Pfam Calmodulin binding protein-like N-terminal domain 80 176 IPR046831 -
Viun1g02992 216 PANTHER OS02G0177800 PROTEIN 29 175 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02992 Viun-Chr1 38538056 38539405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02992 17 175 Calmodulin-binding Proteins AT5G26920 30.000 1.04e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02992 - - vra:106757360 275.404