LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g02991	ATGGTATCAAAAAGGAAATCTTTTGAGAGGCAACGGAGTGGCAAAGTTCCAATTCAGGACCATAAACGGAGCTATGATGATACCAAGCAAGCTCCAATCAGTGGCCTGAGAAATGTGATCAACGCACTATGGCTGAATGACCACTCATCCTATTTGGAAGCTTTTGTGCGAAGAGTGGTAAGGGAGGAGTTGGAAAAGAAAATCAAGGACCAGGCTCATCTATTTCCAAGAAAAAGGGTTAATGAGGCTGGCATATCCGGAGCCAAACCCTTCAAGTTGTGCTTTCTTAATAAGTTACCTAAGACAATTTATACTCGGTCTAATATCGTAGCAGAAGACGAATCACTTCTTCAAATTGCTCTATTTGATGTTAGAACTAAGTCTGTAGTAAAGGAGGGTCCCCTTTCCTCACTAAAGATAGAGATCTGTGTTCTGAACGGTGAGTTCGGATCCGATGACAGTGAGGAGTGGACAGAAGAGGAGTTCAATTCCAATATCTCACGTGAAAGAGAAGGTAGAGAGCCACTCTTGATTGGAGAGAGGTTTATTACTCTTAAAAATGGAGTTGCTTGTATCACTAAAATTGCCATATCTGACAACTCGAGATGGCAAAGAAGCAGAAGGTTCAGGATTGGAGTTAAAGGTGTGCCACCAACTTCCATTGGAGAAAAGATTCAGGAGGGTAGAAGTGAGCCTGTTATTGTGAAAGATAACAGAGGAGAATGCTACAAGAAACACTTCCCTCCATTCTTGGATGATGAACTATGGCGCTTGAAGAAAATCGCTAAGGAAGGAAGAATCCAGAAGCAATTTTCCTTACATGGAATTCACACCGTGAAAGATCTCTTGCGGCAGTGCATAAGCAACGAAGAATCACTATATAAAATGCTTGACATTCCAAAGAAGTCATGGTTAGCGATCACTGACCATGCTAAAACCTGTGTGGTGGATGATTACAAGCTTTACAGCTATTACTCACAAGAACTGCAAATAGGTTTGCTATTCAACTCCATCTACATCCTCGTGGGAGTGACATTTGATTGGGAAATTTATTATTCACCAGATATTCTCACTCCCCAAGAAAAGCATTTGGTAGGAATAGTGAAGCAGCAAGCTTACAAAAATGTCAACAATTTGAAAATGATTGATGAAACTAAATTGAACTGTTTAAACCTAGACGCATGTCTAAAAAAAGCAAGACAGTCCGACACTCCAAATCAATGTCTGCAACACATGGATATGCCAACTGCACAAGGTGAAGCAGTAACATTCCCAGATTACAGTCAACCATCCATCTCTACTTCATATACTGATGAAGTAATGCACGATGGCCAAATTTATGCCGATTCAGAGCCAAGCACAAGAGAAATGCCGCATAACAGTAATGTGTTTGATGAATTTTCCTCTGAGATATACAATGAAGAGGATAGTTGTGACTTTGACGGATCGTGTTTTCCGTTCCTTGAAGGTGGATATTCGATAGAGAATGAAAAATGGGAACCAACAAGTGGCATGTTCTTTGGTTCTTATGATGGAGAAGAATTTAGCCCTTATTCTACTTTCATAAATTCCAGTGTGGACATATCAAGTAATGGCAAACCCAAAGCAGCGTGGTGTAAGATTGGTTTTGCTCTGAAATGGGTTATATCAGCGAAAAGGAGGCATGCAGCTGCCAAAAAGAATGCTCAGCTCTTTTACCATAACTAG	1707	0.406	MVSKRKSFERQRSGKVPIQDHKRSYDDTKQAPISGLRNVINALWLNDHSSYLEAFVRRVVREELEKKIKDQAHLFPRKRVNEAGISGAKPFKLCFLNKLPKTIYTRSNIVAEDESLLQIALFDVRTKSVVKEGPLSSLKIEICVLNGEFGSDDSEEWTEEEFNSNISREREGREPLLIGERFITLKNGVACITKIAISDNSRWQRSRRFRIGVKGVPPTSIGEKIQEGRSEPVIVKDNRGECYKKHFPPFLDDELWRLKKIAKEGRIQKQFSLHGIHTVKDLLRQCISNEESLYKMLDIPKKSWLAITDHAKTCVVDDYKLYSYYSQELQIGLLFNSIYILVGVTFDWEIYYSPDILTPQEKHLVGIVKQQAYKNVNNLKMIDETKLNCLNLDACLKKARQSDTPNQCLQHMDMPTAQGEAVTFPDYSQPSISTSYTDEVMHDGQIYADSEPSTREMPHNSNVFDEFSSEIYNEEDSCDFDGSCFPFLEGGYSIENEKWEPTSGMFFGSYDGEEFSPYSTFINSSVDISSNGKPKAAWCKIGFALKWVISAKRRHAAAKKNAQLFYHN	568

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g02991	568	PANTHER	OS02G0177800 PROTEIN	45	452	IPR012416	GO:0005516
	Viun1g02991	568	MobiDBLite	consensus disorder prediction	1	28	-	-
	Viun1g02991	568	Pfam	Calmodulin binding protein-like N-terminal domain	91	238	IPR046831	-
	Viun1g02991	568	Pfam	Calmodulin binding protein central domain	251	314	IPR046830	-
	Viun1g02991	568	Pfam	Calmodulin binding protein C-terminal domain	320	380	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun1g02991	Viun-Chr1	38532498	38535653	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun1g02991	50	564	Calmodulin-binding Proteins	AT4G25800	30.688	2.76e-76	251

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g02991	-		-	pvu:PHAVU_001G226000g	922.924