Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02989 ATGGAGATGGAGAAAAGGCGTTCCAAGGGAAGCTTCTTTAGCTTGTTTGATTGGAATTCCAAATCTCGAAAGAAGCTGGTTTGGAGCGATCCAGAGATTTCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACACAAGTCGCAGCTCACCAGGATAAAGGTGGATGAAATTGGAGCAAGTCCAAGTAACATTCAAAGTTGTGATTTTGACAGCACCCTCTCAATTTGTAGTGATGAAGGATGTGGGAGCAAAGCTCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCGTTGCCAGCTTCGGCTGTCACTGAGCCCTCCTGCACCTCACATTACGGCTCTACATCTCATGGTGTCTCTGACTGTAATGAGGGTACTCTTCATTCAGTGGATGAGTTTTTCCCTCCAGACTACATAAATACACTGCTTAAGCTGGAGAAGTCTCAATTGGGTGCCATGGAGTCAAGGGCTAGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTACCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCATAATAAACTGCTGTCTCCTATCAAGAGTCCTGGTTTTCTGCCAAAAAATGCTGCTCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCGAGCCCTCAGTCGTATTTGAGGAATAGAACATCTACTGGGTCTTCGTCTGTTCCCTTGAAAATTCTCAATTTGAAAGAGAGATTGGAGGCTGCACAATATACATCAGTGCCTGGAAAGCCTGTGAATATGAGCAAAACCTATCCTGCAAATGGCAAGCTTAGTGAGAGGAGTAGTAATTTGTCTAAATGCACTTCAGCATTCAAGGGTTCAAGAGGTTCAGAAAAAAATAGTTCTAGCCATTTGGCCAGTAAAGGAAAACCAGTTTCACTTGCAATCCACGCCAAAAACAACGCTCATAGTAGAGATACATTGATTTCAAATGGTGATATCAAATGCATGAGACAGAAAGAGAAGAATGAGATGAAGTCGAATCAGTACTCAAGGAGCCAGAAACCAAGTACACAAAAAGCCATGCAGCAGAGACCTTGCTCAAGTCGGAATGGCAATGTGCTTGGGCAGAATAATCAAAAGCAAAATAGCATGACTTCCAAGGGTAAATCAACTTCAAAAATAGATTCCAATAAGCCAACAACACGAGCTTCACCTTCAGAAACTTTTGGAATAAGGAAGACAACAAACAAGGGTGCTACAAATGCCAATGTTCATCCTAGAAGGTCAAGCATCAGGGCAACTGACCTCCAAAAGGAGTTTCCACGATCCAGATCAGTAAGTACTTCCAGAAAGATAAAATATATCAGCAGTGATGTTCATGAGGCTGGAGGTCCTGATAATGCAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACTGATGGAAGTTTTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTCACATCTCCGTTGAGGAGAAGTATGCCTGAGTCATCTTCCTCCACCGGGCACAGTGATAATTTTTATCCCAAAAAACTGTCATTATCTCCACAAGGAAAACATATGATAGACAGTGATGCTCTAAGTATCCTGTTGGACAAAAAGTTACAAGAATTGACATCCAGAATTAACTTACCTCAATGTACCTTGGCCGCAGAGGGGAGTTCTTCTGGTTTGGGATCTAGTGTGCAAGACAACTTTCCCAGTGTAGCAAGCACCATGCCTAAGGAACAAGACAGAAGCCTTTTCCCTGAACTGTTTAGTGATAAACTGGACAGCATTCTTGACAATCGTCCAAGTGATGATCCCGTGCTTCCCATGAATCAGCAACTGCAGACTTCAGAAGTAAATCAAGATCCTAGCTGTAGCAGCAATAGTGAAAGTGGAAATGATATAGTTTGTTGTCGTTCAACTTCTGTTGCGGGGTCTGAAACTCTTGTCAGCGAAAGTTACTTGGATAGTGAAGACAGTGCTTATGCCAGCACAGTCTATTCTTCAATGCAAGACGAAGAAGCATCTAGTTTTTCCCAGATAAGCGAATCTGTATCACTTGAAAGTGAGGTGAAGGGACCAGAGCAAAGCCCTTCCACATCGGGGGATGGAAATATGACCGTCAAACAAATAAGTGGGATATCTAATTCAGTTGATTTCAAAAGATCAAGTAACACAGAACTTGAATATGTACAGGATATTCTTGGAAATGCAGAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTGCAGTCATTACGCCAAATTTATTTGATCTGCTGGAGAATCAGAATAGCAGAACAGAAAACTACGGAGAAGAGTACTCTAAACTTGAAAGGAAGGCTATATTTGATTGTGTGAGCGAGTTCCTGGAGTTAAGATGTAAGCAAGCTTTCATTGGAACGTGCAAAGTATGGCCTGGATGGATGATGTCAGTTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTACAAGGAGATGCTGAGTTTTAGAAGCATGGAAGAGTTAATGGTGGATGAGCTTGTCACAAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGACATACTAG 2640 0.4189 MEMEKRRSKGSFFSLFDWNSKSRKKLVWSDPEISKQGKENVENLHKSQLTRIKVDEIGASPSNIQSCDFDSTLSICSDEGCGSKAPGLVARLMGLDSLPASAVTEPSCTSHYGSTSHGVSDCNEGTLHSVDEFFPPDYINTLLKLEKSQLGAMESRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGFLPKNAAHVMEAAAKIIEASPQSYLRNRTSTGSSSVPLKILNLKERLEAAQYTSVPGKPVNMSKTYPANGKLSERSSNLSKCTSAFKGSRGSEKNSSSHLASKGKPVSLAIHAKNNAHSRDTLISNGDIKCMRQKEKNEMKSNQYSRSQKPSTQKAMQQRPCSSRNGNVLGQNNQKQNSMTSKGKSTSKIDSNKPTTRASPSETFGIRKTTNKGATNANVHPRRSSIRATDLQKEFPRSRSVSTSRKIKYISSDVHEAGGPDNAVNNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPESSSSTGHSDNFYPKKLSLSPQGKHMIDSDALSILLDKKLQELTSRINLPQCTLAAEGSSSGLGSSVQDNFPSVASTMPKEQDRSLFPELFSDKLDSILDNRPSDDPVLPMNQQLQTSEVNQDPSCSSNSESGNDIVCCRSTSVAGSETLVSESYLDSEDSAYASTVYSSMQDEEASSFSQISESVSLESEVKGPEQSPSTSGDGNMTVKQISGISNSVDFKRSSNTELEYVQDILGNAEFMAEEFAMGQTSAVITPNLFDLLENQNSRTENYGEEYSKLERKAIFDCVSEFLELRCKQAFIGTCKVWPGWMMSVQRKSWMAEELYKEMLSFRSMEELMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGTY 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02989 879 MobiDBLite consensus disorder prediction 252 299 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 502 522 - -
Viun1g02989 879 Pfam DUF761-associated sequence motif 77 102 IPR032795 -
Viun1g02989 879 Coils Coil 769 789 - -
Viun1g02989 879 Pfam Domain of unknown function (DUF4378) 734 877 IPR025486 -
Viun1g02989 879 MobiDBLite consensus disorder prediction 564 586 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 564 588 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 252 300 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 340 422 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 332 436 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 502 523 - -
Viun1g02989 879 MobiDBLite consensus disorder prediction 681 713 - -
Viun1g02989 879 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02989 Viun-Chr1 38518064 38522566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02989 3 877 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.770 8.96e-101 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02989 - - gmx:102663635 1378.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02989 1 38518064 38522566 Viun1g02989 1 38518064 38522566 ECH