Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02980 ATGGTTTGCGAGGAAGAGTTGCTGATTGAAAAAGTGTGCGGGCTCTATCAACAAATCTCGAGCCTCGAGAGTCTGAAACCTTGCAAAAATGTCGACATGCTTTTCACCCAACTCGTCCTCACATGCATACCCCGCCCAATAGATGTCACAAACCTAAACAAAAACGTGCAAGAGATTAGATCTCATCTTATAAAACTCTGTGGTGAAGCCGAAGGCCATTTAGAGACCCACTACTCAACCCTCCTAGGCTCATACGACAACCCTCTCCAAAACCTTCATATTTTTCCTTATTATTCTAACTACCTCAAACTCGGTCTCCTTGAGTTCACCATCCTCACCCAACACTGCACCCATGTCCCCACCAAAATCGCCTTCGTCGGTTCTGGACCCCTCCCTCTCACCTCGATCGTGTTGGCGTCCAACCACCTACCTTCCACCACATTTCACAACTACGACATGGACCCTCTAGCCAATTCCAACGCCATGCGCTTGGTCTCCTCTCACCCTGACTTGTCCAACCGCATGCTTTTCCACACCAGTGACATATTAGATGTGTCCAACGCTTTGAAGGAGTACGAGGTTGTCTACTTAGCAGCACTTGTGGGCATGGACAAGGAGGGCAAAAACCGCATCATCGATCACTTGGCCAAGCACATGAACCCTGGCGCATTTCTCATGCTCAGGAGCGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTCGTCGAGCCTTGCGATCTCCGAGGCTTTGAGGTCCTCACCGTGTTCCACCCCACCGACGAGGTCATCAACTCGGTTGTCATAGCACGTAAATATCCTCTCCCTATGCACTCGCTTGACCAAGGCCTTGCCTCCAAGATCCTTCCCAACAAATGCTCCGAGATTCAAGCCTTCAACCCCCTCAACCATGGCAACATCATCGAGGAATTGGCCATTGAGGAACAACTCTAG 948 0.5032 MVCEEELLIEKVCGLYQQISSLESLKPCKNVDMLFTQLVLTCIPPXPIDVTNLNKNVQEIRSHLIKLCGEAEGHLETHYSTLLGSYDNPLQNLHIFPYYSNYLKLGLLEFTILTQHCTHVPTKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSHPDLSNRMLFHTSDILDVSNALKEYEVVYLAALVGMDKEGKNRIIDHLAKHMNPGAFLMLRSAHGARAFLYPVVEPCDLRGFEVLTVFHPTDEVINSVVIARKYPLPMHSLDQGLASKILPNKCSEIQAFNPLNHGNIIEELAIEEQL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02980 316 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Viun1g02980 316 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Viun1g02980 316 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Viun1g02980 316 PANTHER NICOTIANAMINE SYNTHASE 3 4 311 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02980 Viun-Chr1 38475276 38476541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02980 1 313 Nicotianamine Synthase Gene Family AT5G56080 60.000 6.71e-134 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02980 K05953 - gmx:100794250 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02980 1 38475276 38476541 Viun1g02980 1 38475276 38476541 ECH