Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02975 ATGGCGTCTTTCCTCCCCAACCTCCATTCTGTTACGTCATCGCAACAATCCAATCACAAGAATCGCCGCAAACTCGCGCACCACGCTTCCCTCGCTCCCGCTCCCTGGACTTCCCAAACCGAACACCGGATCTACGCCACCAACCTCCTCCACGCGCTCCGCCGTAACAGCCCTGCCGCCGCCAGCGACGTCCGCGCAGCTGCCGACCGTGCTCTCGCAGCCACGGCCAAAGGCCGAACTCGCTGGAGCCGCGCGATTCTTGCGAATCCGTTTGGCCGGTGGAAGCGGAGGCACCACAAGAAGGCCAGGAAGTCCGGCGCCGGATTGATGAAGAAGAGGACGCCGGAGATTCGGAGAACGGTACCGCCGCTGCAGAAGAAAGCGCGCGCTCTCGGACGGTTAATCCCCGGTTGCCGGAAGGTTCCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGATTATATCTCTGCCTTGGAGATGCAAGTGCGAGCCATGACGGCTCTCGCCGACCTCCTCGCCGGCGGCCCCACGCCCCCCGCTCCTCTCCGTTTGAGTTGA 555 0.6288 MASFLPNLHSVTSSQQSNHKNRRKLAHHASLAPAPWTSQTEHRIYATNLLHALRRNSPAAASDVRAAADRALAATAKGRTRWSRAILANPFGRWKRRHHKKARKSGAGLMKKRTPEIRRTVPPLQKKARALGRLIPGCRKVPFPKLLEEAGDYISALEMQVRAMTALADLLAGGPTPPAPLRLS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02975 184 MobiDBLite consensus disorder prediction 1 34 - -
Viun1g02975 184 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 171 IPR044660 GO:0006355
Viun1g02975 184 MobiDBLite consensus disorder prediction 1 19 - -
Viun1g02975 184 CDD bHLH_AtIBH1_like 118 168 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02975 Viun-Chr1 38427075 38428011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02975 36 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G05800 44.604 6.62e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02975 - - gmx:100813766 210.69