Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02964 ATGGCTAGCGGTCTCGTTCCCCTCATGTTAATGATTGTGGTGCAGCTGGTCTATGCCGTCATGAATATCACTTCAAAGCTCGCCATAGAATCTGGGATGAGCCCTCTTGTCCTTGTTGCGTATCGACAACTCTTTGCCACCGTCTCCATTGCTCCCTTTGCTTATTGGCTCGAATGGAAGACACTTCCCAGGTTGACAAAGGAGCTTATGTTTCGGATATTACTATCGTCCTTGACAGGAGTCACAGGAAACCAGATTCTATATTTTGTGGGGCTAAAATTTTCAACTGCTACAATTGCATGTGCACTGTCGAATTTGCTGCCAGCTTTCACTTTTATCCTGGCAGTTATCTTCAGACAAGAGAATCTAGGAATCAAGCAGAGGTCTGGGCTAGCAAAGGTATTCGGGACAATATTGTGTGTGAGTGGAGCGCTGCTTTTGTCATTCTACCATGGAAAAACCATAGGTTTAGGGCAATCTAGTATTCACTGGAGATATGCAGAGAAAATGGAAGGAACTACCACTTCTGGCTCAGGCAACATGTTTGTAGGCCCTTTACTCTTAATTGGTAGCACTCTTGTTTGGGCGCTGTGGTTCGTAATTCAAACCGACATAAGCAAGAAGTTCCCAGCTCCTTACACAAGCACAGGCTTAATGTGTTTCTTGGCAAGCTTTCAGTGCATGTTCATTGCATTATGTTTCGACCACAGTGCCTCAGCTTGGTCACTGCACGATGCCATGAGACTTTCCGCTGCTCTTTATGCGGGAATAATGGCGACCGGGTTATCGTATTCCCTTATGTCATGGGCCATTGAGAGAAAAGGTCCTCTTTATGTATCCGTATTTACCCCTTTGCAGTTAGTCCTCACTGCCGTTTTAAGCTGGGCTTTGCTGCGAGAGAAATTATATGTTGGAACTGCCATAGGGTCTCTGTTGATCGTTTTGGGGCTCTATGCTGTTCTCTGGGGGAAGAGTGAAGAGGTGAGCACGGAAGACGGTATGAAAGAAGCAATGAAGGATCCGAAGAATGACACCGAAATGCAATACTATGTGCCATCCAATGGTAATCGTGTCAGTACCTGA 1083 0.4571 MASGLVPLMLMIVVQLVYAVMNITSKLAIESGMSPLVLVAYRQLFATVSIAPFAYWLEWKTLPRLTKELMFRILLSSLTGVTGNQILYFVGLKFSTATIACALSNLLPAFTFILAVIFRQENLGIKQRSGLAKVFGTILCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTTTSGSGNMFVGPLLLIGSTLVWALWFVIQTDISKKFPAPYTSTGLMCFLASFQCMFIALCFDHSASAWSLHDAMRLSAALYAGIMATGLSYSLMSWAIERKGPLYVSVFTPLQLVLTAVLSWALLREKLYVGTAIGSLLIVLGLYAVLWGKSEEVSTEDGMKEAMKDPKNDTEMQYYVPSNGNRVST 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02964 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Viun1g02964 360 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Viun1g02964 360 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020
Viun1g02964 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Viun1g02964 360 PANTHER WAT1-RELATED PROTEIN 6 328 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02964 Viun-Chr1 38354029 38356908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02964 3 356 Nodulin-like Gene Family AT1G09380 53.994 4.38e-141 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02964 - - gmx:100801512 605.134