Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02940 ATGGCCGGTGACAGCACAGCTAACTGCGTCGATATCCTCATTGCCATCATCCTCCCTCCTCTCGGAGTTTTTCTCAAGTATGCCTGCAAGTGTGAGTTCTGGATCTGTTTGCTGCTCACCATTCTTGGTTACATTCCTGGAATTATCTATGCTGTCTATGCCATCACCAAGTGA 174 0.477 MAGDSTANCVDILIAIILPPLGVFLKYACKCEFWICLLLTILGYIPGIIYAVYAITK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02940 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016020
Viun1g02940 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 6 57 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02940 Viun-Chr1 38206711 38207831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02940 5 57 RCI2 Gene Family AT3G05880 73.585 2.44e-24 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02940 - - vra:106757363 109.383