Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02937 ATGGCGAGAGTTTTCTGGACTGCCATTGCTATAGCACTAGTTTTCAGCAACTGGGTTGATGGGTTCGAAGGTTATTATGAACATCAATTCAATGAAACAGAGTTGTCTTTATTAGAGGCTCATGAAGCTTCCTTATCCTACGCCGGGAGTAACCTTCTGCTGGTAGGACTCACCCTTGTCCAAAATGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTACCTGGTTATCACTTGCACCGGGGATATGGATCAGGAGCAAATAGCTGGCTTATTAATTTAGAGGGTGGTGGATGGTGCAATAATATCAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAAGAGATACCTTTCACTGGAATACTGAGTAATAAGGCTGAAGAAAATCCAGACTTTATCAACTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTTCTGGGGACAGTGAAGATGAGACTGCTGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCTATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCTGATCAGGCTCTTCTTTCGGGATGTTCCGCGGGTGGCCTAGCTACAATTATTCATTGTGATGAATTTCGTGGTCTCTTTCCGGTGACCAGCAGAGTCAAATGTCTAAGTGATGCTGGGTTGTTTCTTGATGCGATTGACGTATCTGGCGGGCGCACACTCAGGAACTTATACAGTGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTGCCTCAAATTTGTACTAATCACCTTGATCCCATCTCGTGCTTCTTCCCTCAAAACTTGATCGCCAGTGTTAAGACCCCGCTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCTGCAGATCCGCATGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCACCGCAAATTCAATATCTGCAAGGATTCAGGAACCACATGCTGAATGTTATTAAAGACTTCGCAAGAGCAAACCAGAATGGCTTGTTTATCAATTCATGTTTTTCTCACTGCCAAACTGAGAGACAGGATACATGGTTTGCTGACAATTCTCCTGTTATTAGGAACAAGGCTATTGCTCTGGCTGTTGGAGATTGGTATTTCGATCGAGCAGGTGTTAAGGTCATTGATTGTCCTTATCCTTGTGATAACACGTGTCATCATCTGATTTTCCGATGA 1257 0.4352 MARVFWTAIAIALVFSNWVDGFEGYYEHQFNETELSLLEAHEASLSYAGSNLLLVGLTLVQNAAAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFINWNRVKLRYCDGASFSGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFADQALLSGCSAGGLATIIHCDEFRGLFPVTSRVKCLSDAGLFLDAIDVSGGRTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHDCRLNHAKCTAPQIQYLQGFRNHMLNVIKDFARANQNGLFINSCFSHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDRAGVKVIDCPYPCDNTCHHLIFR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02937 418 PANTHER NOTUM-RELATED 41 414 IPR004963 GO:0016787
Viun1g02937 418 Pfam Pectinacetylesterase 53 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02937 Viun-Chr1 38157161 38160786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02937 1 418 Carbohydrate Esterase AT1G57590 67.376 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02937 K19882 - gmx:100782401 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02937 1 38157161 38160786 Viun7g01903 7 24190363 24197352 ECH
Viun1g02937 1 38157161 38160786 Viun1g02937 1 38157161 38160786 ECH
Viun7g01903 7 24190363 24197352 Viun1g02937 1 38157161 38160786 ECH
Viun3g05531 3 61155915 61160267 Viun1g02937 1 38157161 38160786 ECH
Viun1g02937 1 38157161 38160786 Viun7g01929 7 24444625 24448907 PCT