Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02928 ATGGAAGGATCTTGGAGTACAAGTAGAAGTGCATCTGGGTGCATAGTTCTCATAGTGCTCTTTGCTCTAACATGCGCATGGAGGGTGCTGAACTTGTTATGGCTAAGGCCAAAGAGGCTAGAGAGACTCCTACGAGATCAAGGCCTTCAAGGAAATTCCTACAGCCTTTTCAATGGAGATTTGAAGCAGATTATGAAGATGCAAAAGGAAGTCACATCCAAACCCATGAAACTCTCCTCTCATGATTTAGTGCCACGTGTCTTCTCTTATCATCAGCACAGTGTCATCAAACATGGGAAGAATCCTTTTATTTGGTTTGGACGAAAACCAAGGGTGATCATCACAGAGCCTGAGTTAATCAAAGATGTACTTAACAAGACCCAAGCTTTCCCAAAGCCTGACACGAATCCACTAGTCAAGTTACTAGCTAGTGGTCTTATAAATTATGAGGGAGAAAAATGGCACAAGCACAGAAGAATAGTTAGTCCTGCATTCAATTTAGAAAAGTTGAAGAATATGGTACCAATATTCTTCAACAGTTGCAATGATCTAATTATCAAGTGGGAGGAGATGTCTTCAGAAGGATCATGTGAAATAGATCTATGGCCTTTCCTTCAAAATTTAACCTGTGATATTATTGCTCGAGCAGCATTTGGAAGTAGTTCTGAAGAAGGAAGAAGAATATTTCAACTTCTAAAAGAGCAAGCAGGGCTTGCAGCGCAAGTTATGATGAAAGATTACATCCCTGGATGGAGATTTCTACCAACTCCTACGCGTAGGAGGATGAAGGAAATTGATAGAGAAATAAAAGCTTCACTTACAAATTTGATTAACAACAAAGAGAATGCACTAAAGGTGGGTGAAACTGCTGGGAATGACTTGTTATGTTTACTTTTAGAGTCAAATCACAAGGAAATTGAAGAACGTGCAAACAGTAAGACTATTGGAATGAGTCTTGAAGAGGTAATCGATGAATGCAAGCTATTCTACGCTGCTGGGCAAGAAACCACTTCATCTTTACTTGTTTGGACCATGGTGATGTTAAGTATGCACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTTTTACAAGTATTTGGAAAACAAAAACCCAACTTTCTTGGGCTAAGTCACCTTAAGATTGTCACAATGATTTTGAATGAAGTTCTAAGGCTGTACTCACCAGTAATTGGCCTTGATAGAAATGTTCACGAAGATGTGAAACTTGGAAACCTATCATTACCTGCTGGAGTGCAAGTTTCCTTACCAACAATTATGGTTCACCATAACCCTGAACTTTGGGGTGATGATGCCCATAATTTCAATCCGGAAAGATTTTCTGAAGGAGTTCTAAAGGCCACTAATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGGGTGTGCATTGGACAAAACTTTTCCATGTTGGAGGCAAAGATGGCTTTATTAGTGATTTTACAACATTTCTCATTTGAACTTTCTCCAGTTTATGCTCATGCTCCTGTTACAGTGATTACTCTTCAACCCCAATATGGTGCTCATGTCATTTTGCGGAAACTGCAAGTATAA 1575 0.3987 MEGSWSTSRSASGCIVLIVLFALTCAWRVLNLLWLRPKRLERLLRDQGLQGNSYSLFNGDLKQIMKMQKEVTSKPMKLSSHDLVPRVFSYHQHSVIKHGKNPFIWFGRKPRVIITEPELIKDVLNKTQAFPKPDTNPLVKLLASGLINYEGEKWHKHRRIVSPAFNLEKLKNMVPIFFNSCNDLIIKWEEMSSEGSCEIDLWPFLQNLTCDIIARAAFGSSSEEGRRIFQLLKEQAGLAAQVMMKDYIPGWRFLPTPTRRRMKEIDREIKASLTNLINNKENALKVGETAGNDLLCLLLESNHKEIEERANSKTIGMSLEEVIDECKLFYAAGQETTSSLLVWTMVMLSMHPDWQARAREEVLQVFGKQKPNFLGLSHLKIVTMILNEVLRLYSPVIGLDRNVHEDVKLGNLSLPAGVQVSLPTIMVHHNPELWGDDAHNFNPERFSEGVLKATNGRVSFFPFGWGPRVCIGQNFSMLEAKMALLVILQHFSFELSPVYAHAPVTVITLQPQYGAHVILRKLQV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02928 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 515 - -
Viun1g02928 524 SUPERFAMILY Cytochrome P450 85 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 CDD CYP72 88 518 - -
Viun1g02928 524 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Viun1g02928 524 Gene3D Cytochrome P450 37 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 Pfam Cytochrome P450 94 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02928 524 FunFam Cytochrome P450 734A1 34 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02928 Viun-Chr1 38086865 38089853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02928 26 522 Cytochrome P450 AT3G14610 54.800 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02928 - - gmx:100780780 838.18