Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun1g02919 | ATGTTTCGAGTTGATTATGTGGGCAACGGTCCTTACCTGAGTTGTGCTTCGTCTGTTGTTCATCACCGGCTATCTTCAAGCGACCGGTTCCTGGTGCTGTCCTCAGACGGGCTTTACCAATATTTCAACAATGAAGAGGTAGTTGTCCATGTCACCTGGTTCCTGGAAAATGTTCCCGAAGGCGATCCTGCAAAATACCTTGTAGCAGAGCTTCTATTCCGTGCCGCAAAAAATGAATGGAATGGATTTTCATGA | 255 | 0.4627 | MFRVDYVGNGPYLSCASSVVHHRLSSSDRFLVLSSDGLYQYFNNEEVVVHVTWFLENVPEGDPAKYLVAELLFRAAKNEWNGFS | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun1g02919 | 84 | Pfam | Protein phosphatase 2C | 12 | 75 | IPR001932 | - | |
| Viun1g02919 | 84 | SUPERFAMILY | PP2C-like | 9 | 75 | IPR036457 | - | |
| Viun1g02919 | 84 | Gene3D | - | 1 | 83 | IPR036457 | - | |
| Viun1g02919 | 84 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 84 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun1g02919 | Viun-Chr1 | 38014302 | 38014813 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Viun1g02919 | 1 | 76 | PP2C-type Phosphatase Gene Family | AT2G46920 | 73.684 | 9.27e-38 | 131 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun1g02919 | - | - | vun:114165308 | 177.178 |