Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02912 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGCCACTCTTTTTGTTACGTGAGGCCTTCTATTTTTGAATCTCCTGCCATTACCCCTTCAAACTCTGAGAGGTTCACTGTTGATTCTAGCACCCTTGATTCTGAGACATTGAGTGGTTCATTTAGGCATGAGACCATCGAAGAGAGGCCTGGCAAGAATGTTCCGGAGACAACATTCAAGACAATATCAGGGGCTTCGGTCAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCTCTACTTGCTAGTGATGTTCTAGAGCCTGCTGCATCCTTTGAGGGAACATCGTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGCGGTTCTGGACCTTTGAATGGATTCATGTCGGGGCCATTGGAGAGATTTGCTTCCGGTCCCTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTAATGTCAGGACCTCTTGATGCCACTGACAAGTCCAACTTCTCAGCCCCCCTTGCACGTGGTCGCCGAAGGCCACACCTCCAGCGCCTCATGAGAAGTGTGAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCCAAGCACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCCCAACTAGCTTGGAATTCCAAAGAGGCGAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGTTGGATCGTCGGAGTTGGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCCGGTGAAGACAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTTAAACCTGATGTCCTTAATAATGGAAATGATGTAGTTGCTCTAGAATGCGGTAGGGAGGAAATGTCAGATGCTCATAATAACATTTCAAATGAAGAAAGATCCTGCTGTACAGAAACTTCTTGTCCAGTAATGGTCAAGGATCAGCCATCTAATAGTGAGATAGTGGAGGTAAATGCTGAAATTAAGGTAAATGTTGAACAGAAAAATTGTGGAAGTCCCAGTGTTGACCATCCTGTTCCTGTATCTGTTCCAATTGGACAATTGAGTGGTCAATGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAAGTGTCAGAACAAGGCAAGGATTCTATAGTTCCTGCTGAACTAAAACAAGAAAGGCAGTTGAGGTTCTGCTCATCTGATGGTAAAGAGGATAGATCTGGACACCAGGACGAATGTCCTACTACTTCAGGGGAAAATGGACGCCCTGGGTTTAGTTCGACTAATCTGGAGCCTATAGCTCCCTTTTCTGTTTCAGGACAAAGGCAGAATACAAGAAAGTCATATATTGGTACAAAAATCAGAAAAATGTACAGGAAACAAAAGTCCTTACGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTTTTGACAAGAAATTAGTGGAATCCGCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCTGGCACTTGAAAGAACAGAAGAGGCATACTTGAAAATGGTGGAGAATAGTATGGATAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTATTAGTGATGCTGATGAAGGATCAAGATGTCTATGTTATGAACCTAGGAGATAGTCGTGCCATTTTGGCTCAAGAAAGACCAAATGATCGTCATCCTAATCCTTGTCTCGTCAAAGATGACATGAGGCATAGGAATCGTTCTAGAGAGTCATTAGTAGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAACATAAATAAACATGTCAACAAGATAAACAAAAATCGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCTACTGATCACAGCACAAGTATAGAAGAGGAAGTTTTTAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATGTTTTAACGAACCTCTACTGAAGATGTTTCGAGTTGATTATGTGGGCAACGGTCCTTACCTGAGTTGTGCTTCGTCTGTTGTTCATCACCGGCTATCTTCAAGCGACCGGTTCCTGGTGCTGTCCTCAGACGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACCTGGTTCATGGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTTATAGCAGAGCTTCTATTCCGTGCTGCAAAAAAGAATGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATCGCCGTAAATATCATGATGATGTTTCTGTCATGGTCGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2667 0.4368 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHETIEERPGKNVPETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSKHSMGVSWVQRLFLHPVSQLAWNSKEAKFRSEVSRNCTEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPDVLNNGNDVVALECGREEMSDAHNNISNEERSCCTETSCPVMVKDQPSNSEIVEVNAEIKVNVEQKNCGSPSVDHPVPVSVPIGQLSGQCRRSVRLYELLQMESWNEQVSEQGKDSIVPAELKQERQLRFCSSDGKEDRSGHQDECPTTSGENGRPGFSSTNLEPIAPFSVSGQRQNTRKSYIGTKIRKMYRKQKSLRKKLFPWSYDWHREETCFDKKLVESAGPIRICKSGVDHNAVLRAMALALERTEEAYLKMVENSMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPCLVKDDMRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPCFNEPLLKMFRVDYVGNGPYLSCASSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02912 888 SUPERFAMILY PP2C-like 283 880 IPR036457 -
Viun1g02912 888 Gene3D - 517 885 IPR036457 -
Viun1g02912 888 PANTHER PROTEIN PHOSPHATASE 2C 273 878 IPR015655 GO:0004722|GO:0006470
Viun1g02912 888 SMART PP2C_4 271 877 IPR001932 -
Viun1g02912 888 Pfam Protein phosphatase 2C 704 850 IPR001932 -
Viun1g02912 888 Pfam Protein phosphatase 2C 600 648 IPR001932 -
Viun1g02912 888 CDD PP2Cc 585 879 IPR001932 -
Viun1g02912 888 FunFam Protein phosphatase 2C 32 248 417 - -
Viun1g02912 888 ProSiteProfiles PPM-type phosphatase domain profile. 269 879 IPR001932 -
Viun1g02912 888 MobiDBLite consensus disorder prediction 493 524 - -
Viun1g02912 888 MobiDBLite consensus disorder prediction 478 492 - -
Viun1g02912 888 MobiDBLite consensus disorder prediction 478 524 - -
Viun1g02912 888 Gene3D - 245 412 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02912 Viun-Chr1 37989803 37995514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02912 1 888 PP2C-type Phosphatase Gene Family AT2G46920 63.707 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02912 - - gmx:100786856 1677.92