Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02906 ATGAGAATGAGGGTGCTCCTTCTGATAGTATTTACCTTTGTTTCTGTGGTTATCAATGTTAGATCTGAGTATGAGTTTTTGGACCAAAACGATGCCGTTTCAATGGCTGCAAGGCCTCTCATGGTCCCTCTCACTCTTATTCCGGGAGCTGATTCCAAAGGAGCTGTTTGTTTAGATGGAACGTTGCCTGGTTACCACTTTCATCCTGGATTTGGATCTGGGGCAAATAGTTGGCTCATTCAATTGGAGGGTGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTCAGAAAAACTACTCGTCGTGGTTCCTCAAAATTCATGGAAAAGCAACTAGCATTCACAGGGATATTGAGCAACAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAGACGAGGCTGCACAGCTTCAATTCCGAGGACAAAAAATCTGGGAAGCTGCAATGGAGGAATTGTTGTCAAAGGGGATGAAGAAGGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCTGGTGGTCTAGCATCTATAATACACTGTGATGAGTTCCGGACCTTATTTCCTCCATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTCCTGGATGCGGTTGATGTTGCTGGGGTTCGCACAATGAGGAATCTCTTTGGAGGTGTAGTTAAGTTACAGGAAGTGCAAAAAAATCTTCCAAAAAGTTGTCTCAGTGAATTGGACCCAACTTCGTGCTTTTTTCCTCAAAATTTGATCAACCATGTTCAGACTCCATTGTTTCTTCTCAATGCAGCTTATGATTCATGGCAGGTCCAAGAAAGTTTGGTCTCTCGTTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAACATGATCGTGCACTCTGTAACTCATCTCAAATTCACATTTTCCAAGACTTCAGAAATCAAATGCTAAACTACATCAAAGGCTTCTCAGGGGAACCTCGTACTGGGTTATTCATCAATTCTTGTTTTGCTCATTGCCACTCTGAATTACAAGATACTTGGTTTGCTGATGACTCTCCAGCTATCGGCAAGACGCCAGTTGCAATTTCTGTTGGACAATGGTATTTTGATCGGAAAACTGTCAAAGCTATAGACTGTCCTTACCCCTGTGACAAAACCTGCCATAATTCGGTTTTCAAGTGA 1218 0.4286 MRMRVLLLIVFTFVSVVINVRSEYEFLDQNDAVSMAARPLMVPLTLIPGADSKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKFMEKQLAFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQDEAAQLQFRGQKIWEAAMEELLSKGMKKANQALLSGCSAGGLASIIHCDEFRTLFPPSTKVKCLSDAGFFLDAVDVAGVRTMRNLFGGVVKLQEVQKNLPKSCLSELDPTSCFFPQNLINHVQTPLFLLNAAYDSWQVQESLVSRSADPHGSWNDCKHDRALCNSSQIHIFQDFRNQMLNYIKGFSGEPRTGLFINSCFAHCHSELQDTWFADDSPAIGKTPVAISVGQWYFDRKTVKAIDCPYPCDKTCHNSVFK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02906 405 PANTHER NOTUM-RELATED 20 401 IPR004963 GO:0016787
Viun1g02906 405 Pfam Pectinacetylesterase 37 385 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02906 Viun-Chr1 37966622 37971088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02906 3 405 Carbohydrate Esterase AT2G46930 65.777 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02906 K19882 - gmx:100785270 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02906 1 37966622 37971088 Viun7g01903 7 24190363 24197352 PCT