Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02899 ATGGAGAACCGACACCACCGTGAATTGACCTTCTTAAGCTCCGGCGGCGACTTCCTCAACCCCGCTTTGGATCACGCAACCCACAACGCCGATCCTCCCATCAAAGAAATGGACTTCTTCTCCTCATCACCTTCATCTCCGGCTACTCATAAAACCAACACCACCAATCGTATCAACCATGATCATCACAACCATGTTGGACATCAAGATCACACTCATCGCCAAGGATCACCAACACAACCTGTCAACACCGGACTCAATTTAACTTGTGCAAGTACCGGAGTGACAAAAGAAGAAAATGGTGAAAATCATGAGGCTGAGCTGAGTTCCCTTGAAAGTCAATTGCGGAGACTACAGGAAGAGAATCGCAAGTTGAGGACTGTGCTGGACCAGATTACCAGAAGCTATGCCCAACTACAAGCTCAGTTATTCATCACTCTGCAGAAACAAAAGCTTCCTCAGAATACGGAAGCAAAGGAACAAAAAAATGCGGACCCAGCTGGAGTATGCAGGAAGTTAGAGGTGGTGAATGAAGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGTCGCTCAAACAACGTTGAGGTATTGTCAAAGACAGATGACGATGAGGCTCCTCAATTGACTAAACTGAACCTCGGAAAACAGGCTTTCGATGCTGCAGAAGATGTTCTTGACCGGTCCTCCTCACAGAGCTGGGGCTCATCCAGGTTAGAAGAACAACCCAAAACTGCAGAACAAGTTGCTGCGGATCAGGTTCCTCTCAGGAAAGCCAGGGTTTCCGTACGAGCCAGATCAGAAGCTCCACTGATCAGCGATGGTTGTCAGTGGAGGAAATATGGACAGAAAATGGCGAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACTATGGCTGTAGGATGCCCAGTGCGCAAACAGGTGCAGAGATGCGTAGAAGACAAGACGGTGTTGATAACAACCTACGAAGGCAATCACAACCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACGTCAGCAGCCGCCGCCATGCTCCTCTCAGGTTCAACCGCCAGCAAGGAAGCCCTCACAAACTCTGCAGGATATTACTCTTCACTTCCCTACGCTTCAATGGCAACCCTATCAGCTTCAGCACCATTCCCAACCATTACTCTCGACCTGACCCAAAACACCAGCGCCATGCACCTCCACCGCCTACCACCCCATGCCACCACGTTCCCTCTTCCACTGCATGCTTCCGGTGGTCACCACCTTCTAGGCCACCCCTTGTTCTTCTCACAGAAGCTTCCACCTGTGGCATCACCCCTACTTCATCCACGACAACCTTCATCTATGGTCGAATCGGTTAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAGTACCTAGAGGCGGTGATGGTAACAGCAATGGAACTACTGGTGCAATTGGGTCACCGCAGCTTCCTCAGTCATGCACTACTTTCTCCACCAACTAG 1536 0.5039 MENRHHRELTFLSSGGDFLNPALDHATHNADPPIKEMDFFSSSPSSPATHKTNTTNRINHDHHNHVGHQDHTHRQGSPTQPVNTGLNLTCASTGVTKEENGENHEAELSSLESQLRRLQEENRKLRTVLDQITRSYAQLQAQLFITLQKQKLPQNTEAKEQKNADPAGVCRKLEVVNEASVCDEKTDGEVSVCRSNNVEVLSKTDDDEAPQLTKLNLGKQAFDAAEDVLDRSSSQSWGSSRLEEQPKTAEQVAADQVPLRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCVEDKTVLITTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSTASKEALTNSAGYYSSLPYASMATLSASAPFPTITLDLTQNTSAMHLHRLPPHATTFPLPLHASGGHHLLGHPLFFSQKLPPVASPLLHPRQPSSMVESVSAAIASDPNFTAALAAAISSIIGVPRGGDGNSNGTTGAIGSPQLPQSCTTFSTN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02899 511 MobiDBLite consensus disorder prediction 230 256 - -
Viun1g02899 511 MobiDBLite consensus disorder prediction 489 511 - -
Viun1g02899 511 Gene3D WRKY domain 260 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02899 511 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02899 511 MobiDBLite consensus disorder prediction 230 246 - -
Viun1g02899 511 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 486 IPR044810 GO:0003700
Viun1g02899 511 SUPERFAMILY WRKY DNA-binding domain 268 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun1g02899 511 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun1g02899 511 MobiDBLite consensus disorder prediction 55 72 - -
Viun1g02899 511 Coils Coil 101 142 - -
Viun1g02899 511 MobiDBLite consensus disorder prediction 40 84 - -
Viun1g02899 511 FunFam probable WRKY transcription factor 31 260 337 - -
Viun1g02899 511 MobiDBLite consensus disorder prediction 40 54 - -
Viun1g02899 511 Pfam WRKY DNA -binding domain 277 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02899 Viun-Chr1 37883562 37886955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02899 94 479 WRKY Transcription Factor Family AT4G04450 44.712 2.38e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun1g02899 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02899 - - gmx:100817839 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02899 1 37883562 37886955 Viun7g01896 7 24103387 24106184 PCT