Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02892 ATGGCAGTGTCTGTGCTACGAACAAAACGAGGCCTAGTTAAGCCATGGAAGGAGACTCCACTGACCACACTAGATTTGTCAGTGATCGATAGGTTACCTGTTCTAAGATGCAACGCTCAAACCTTGCATGTGTTCAAACACGGTCCTCAAGCAACAAGGGTCATAAAAGAGGCCCTCTCCAAAGCACTCGTTCCGTATTACCCTCTTGCGGGAAGACTCAAAGAATCGCAACTCGGGTGCCTTCAGATCGAGTGCTCTGGTGATGGCGTGTGGTATGTTGAGGCATCTTCTGATTGCACCCTCCACTCTCTTAATTTCTTTGATGATGTTCACTCTATTCCTTATCATCATCTTCTTCCCGATGCTGTTCCCGAGACCCAACCCCTCGTGCAAATGCAGGTGACACAATTTGCTTGCGGGGGTTTTGTGATAGGCCTCATATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAGTAGGGGAACTAGCTAGAAATCTAGAGAAACCTAGCATTGAACCAGTGTGGCACAGAAACTTCTTTCCATCTTCTCAAATCACTGCGTTGCCACCAACACCACTCGCTCCTCCTGAAATGCCAGAATACAAACTACACCATGCTAACATAGACATGCCCCTGGATCAAATCAACCGACTGAAGAGAGAATTCCAACAAGTGACTGGACTCAATTGCTCCACCTTCGAGATTGTTGCAGCAGCATGTTGGGCCAGTCGAACAAGGGCCGTTCGATTTGAGCCCAATACGGAACTGAAGCTGGTGTTCTTTGCAAATTGCCGTCAACTGTTGGACCCAGCTCTGCCGAATGGCTTCTACGGCAACTGTTTCTTCCCGGTGACGATGACGGCTTCGTGTGAGTCACTTAGGAATGCAACAACGGTTGGTGTGGTGAAGCTGATACAAGAAGCGAAGGCCAAGTTAGGCGTGGAATTTGACAGGTACTTGAAGGGAGAGCATTTGAAAAATGGAGAAGACCCTTTTGCGCCTCCACTCACCTACACCACTCTCTTCGTGTCTGAGTGGGGAAGGCTGGGATTCAACCACGTGGATTATCAGTGGGGTCCACCCGTCCACGTGGTTCCCATCCAAGGCTCTAGCATTATACCAGTGGCCATTGTGGGGTCCATGCCTCTTCCCAGCAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGCCTCATCGCGTTCCTTTCCTTCATGAGATGCATGGTGTGATGAATGAGGGACTCAGTATGTAA 1272 0.4937 MAVSVLRTKRGLVKPWKETPLTTLDLSVIDRLPVLRCNAQTLHVFKHGPQATRVIKEALSKALVPYYPLAGRLKESQLGCLQIECSGDGVWYVEASSDCTLHSLNFFDDVHSIPYHHLLPDAVPETQPLVQMQVTQFACGGFVIGLIFCHSICDGLGAAQFLNAVGELARNLEKPSIEPVWHRNFFPSSQITALPPTPLAPPEMPEYKLHHANIDMPLDQINRLKREFQQVTGLNCSTFEIVAAACWASRTRAVRFEPNTELKLVFFANCRQLLDPALPNGFYGNCFFPVTMTASCESLRNATTVGVVKLIQEAKAKLGVEFDRYLKGEHLKNGEDPFAPPLTYTTLFVSEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSMPLPSKGIRLMTWCVEEPHRVPFLHEMHGVMNEGLSM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02892 423 PANTHER ACYL TRANSFERASE 4 3 414 - -
Viun1g02892 423 Pfam Transferase family 5 373 - -
Viun1g02892 423 Gene3D - 1 200 IPR023213 -
Viun1g02892 423 Gene3D - 201 405 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02892 Viun-Chr1 37835954 37837511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02892 12 379 Monolignol Biosynthesis Gene Families AT5G48930 28.500 5.70e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02892 - - gmx:100783128 720.694